Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_031242.1
Length=174307
Score E
Sequences producing significant alignments: (Bits) Value
seq2084 82.4 9e-11
>seq2084
Length=3937
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 18249 GGGGGATTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCGAGT 18308
||||| ||||||||| ||| ||||||||||||||||||||||| |||| | |||||| |
Sbjct 2678 GGGGGTTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAAGGGTTCGATT 2619
Query 18309 CTCCTATTCTCCA 18321
| | || ||||||
Sbjct 2618 CCCTTAATCTCCA 2606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557625429853920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |