Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq223 86.0 5e-12
>seq223
Length=82600
Score = 86.0 bits (94), Expect = 5e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
||||| ||| ||||||||||| | ||||||||||||| ||| | |||||||| ||
Sbjct 43189 CCAGCCACTTACCGGCAAAGATTAGTCGCTGCTGATCTGGAGGGATTCCTTCCTTATCTT 43248
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|| ||| ||||| | | ||||| |||| | || || |||| |||||| || |
Sbjct 43249 GAATTTTCGTCTTCACGTTATCAATGGTATCGGACGGCTCAACTTCCAGCGTAATAGTTT 43308
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| || || || || ||||| || || ||||||
Sbjct 43309 TGCCGGTTAGCGTTTTCACAAATATCTGCATG 43340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359972166036252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |