Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq4574 125 6e-24 seq4130 113 4e-20 >seq4574 Length=39733 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 || ||| || || || | || |||| |||| || |||||||| ||||| ||||| || Sbjct 20812 GTATCCACCACGAAGGCGAAGAACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATC 20871 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | || || | ||||||||||||| ||||||||| | || |||| |||||| || Sbjct 20872 GGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGG 20931 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | |||||||||||| ||||||| ||| || | ||| ||||||| | ||| Sbjct 20932 TGGAATGCCTTCCTTGTCCTGGATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTC 20991 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 | ||| | || |||||||| || || || || || ||||| || |||||| Sbjct 20992 CACTTCTAGTGTTATGGTCTTACCCGTCAAAGTCTTTACAAAAATCTGCATT 21043 >seq4130 Length=21019 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 || ||| || || || | || || | |||| || |||||||| ||||| || || || Sbjct 11825 GTATCCACCACGAAGGCGAAGAACTAGGTGCAGCGTCGACTCCTTCTGAATATTGTAATC 11884 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | || || | ||||||||||||| ||||||||| | || |||| |||||| || Sbjct 11885 GGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGG 11944 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | |||||||||||| ||| ||| ||| || | ||| ||||||| | ||| Sbjct 11945 TGGAATGCCTTCCTTGTCCTGGATTTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTC 12004 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 | ||| | || ||||| || || || || || || ||||| ||||||||| Sbjct 12005 CACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATTTGCATT 12056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422232928220180