Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 118 1e-21
seq4574 96.9 4e-15
seq4154 96.9 4e-15
seq3589 96.9 4e-15
seq3296 96.9 4e-15
seq4435 95.1 1e-14
seq3868 86.0 7e-12
>seq4130
Length=21019
Score = 118 bits (130), Expect = 1e-21
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| |||||||||||||| | || || || |||| || |||||||| || || ||
Sbjct 11864 CTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 11923
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| ||||||||||| || | || | || ||||||||| ||||||| ||||| |
Sbjct 11924 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTTTGCTTTGACGTT 11983
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | || || | ||||| |||| || |||||||| ||||| | ||||||||
Sbjct 11984 TTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTAC 12043
Query 43172 AAAGATTTGCATT 43184
||| |||||||||
Sbjct 12044 AAAAATTTGCATT 12056
>seq4574
Length=39733
Score = 96.9 bits (106), Expect = 4e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| |||||||| ||||| | || || || |||| || |||||||| || || ||
Sbjct 20851 CTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 20910
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| ||||||||||| || | || | || ||||||||| ||| ||| ||||| |
Sbjct 20911 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATCTTTGCTTTGACGTT 20970
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | || || | ||||| || | || ||||| || ||||| | ||||||||
Sbjct 20971 TTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTACCCGTCAAAGTCTTTAC 21030
Query 43172 AAAGATTTGCATT 43184
||| || ||||||
Sbjct 21031 AAAAATCTGCATT 21043
>seq4154
Length=21672
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| |||| ||||||||||||| |||||| | ||||||||||| ||||||||||||
Sbjct 5421 TCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACT 5480
Query 60125 ATACTACCGAGGA 60137
|||||||||||||
Sbjct 5481 ATACTACCGAGGA 5493
>seq3589
Length=11941
Score = 96.9 bits (106), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| |||| ||||||||||||| |||||| | ||||||||||| ||||||||||||
Sbjct 7331 TCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACT 7272
Query 60125 ATACTACCGAGGATTG 60140
||||||||||||| ||
Sbjct 7271 ATACTACCGAGGACTG 7256
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 6901 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 6842
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 6841 TACTACCGAGGA 6830
>seq3296
Length=9210
Score = 96.9 bits (106), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| |||| ||||||||||||| |||||| | ||||||||||| ||||||||||||
Sbjct 1856 TCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACT 1915
Query 60125 ATACTACCGAGGATTG 60140
||||||||||||| ||
Sbjct 1916 ATACTACCGAGGACTG 1931
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 2286 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 2345
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 2346 TACTACCGAGGA 2357
>seq4435
Length=31364
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 1511 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 1570
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 1571 TACTACCGAGGA 1582
>seq3868
Length=15882
Score = 86.0 bits (94), Expect = 7e-12
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACC 60132
|| ||||||||||||| |||||| | ||||||||||| ||||||||||||||||||||
Sbjct 15644 GCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTATACTACC 15585
Query 60133 GAGGA 60137
|||||
Sbjct 15584 GAGGA 15580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571781110889400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |