Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq4130 109 4e-19 seq4574 96.9 3e-15 >seq4130 Length=21019 Score = 109 bits (120), Expect = 4e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 18096 TATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG 18155 ||||| || || || | ||| || | ||| || || || || || ||||| ||||| ||| Sbjct 11826 TATCCACCACGAAGGCGAAGAACTAGGTGCAGCGTCGACTCCTTCTGAATATTGTAATCG 11885 Query 18156 GCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG 18215 | || ||| || || |||| || ||||||||| |||| |||| || ||||| Sbjct 11886 GACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGT 11945 Query 18216 GGCACGCCTTCCTTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTC 18274 || | ||||||||| || |||| |||||| ||| | | | | ||| ||| | ||| Sbjct 11946 GGAATGCCTTCCTTGTCCTGGATTT-TTGCTTTGACGTTTTCGATAGTATCAGAAGCCTC 12004 Query 18275 GGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || ||| |||| || ||||| || |||||||||||||||||| Sbjct 12005 CACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATTTGCATT 12056 >seq4574 Length=39733 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 18096 TATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG 18155 ||||| || || || | ||| |||| ||| || || || || || ||||| || || ||| Sbjct 20813 TATCCACCACGAAGGCGAAGAACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCG 20872 Query 18156 GCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG 18215 | || ||| || || |||| || ||||||||| |||| |||| || ||||| Sbjct 20873 GACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGT 20932 Query 18216 GGCACGCCTTCCTTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTC 18274 || | ||||||||| || || | |||||| ||| | | | | ||| ||| | ||| Sbjct 20933 GGAATGCCTTCCTTGTCCTGGATCT-TTGCTTTGACGTTTTCGATAGTATCAGAAGCCTC 20991 Query 18275 GGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || ||| | || || ||||| || ||||||||||| |||||| Sbjct 20992 CACTTCTAGTGTTATGGTCTTACCCGTCAAAGTCTTTACAAAAATCTGCATT 21043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379320398283225