Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 123 2e-23
seq4574 118 9e-22
seq3785 87.8 2e-12
>seq4130
Length=21019
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| ||||||||| |||| || ||||| || || |||| || || | ||
Sbjct 12055 ATGCAAATTTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTCT 11996
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||||| |||||| | ||| ||||||||||||| | || || || |||
Sbjct 11995 GATACTATCGAAAACGTCAAAGCAAAAATCCAGGACAAGGAAGGCATTCCACCAGATCAG 11936
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || || ||||| ||| |||| ||| | || || |||||| ||
Sbjct 11935 CAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGTACATTGTCCGATTACAAT 11876
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| || || ||||| || || || || |||
Sbjct 11875 ATTCAGAAGGAGTCGACGCTGCACCTAGTTCTT 11843
>seq4574
Length=39733
Score = 118 bits (130), Expect = 9e-22
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| ||||||||| |||| || || || || || | || || || | ||
Sbjct 21042 ATGCAGATTTTTGTAAAGACTTTGACGGGTAAGACCATAACACTAGAAGTGGAGGCTTCT 20983
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | |||||| |||||| || ||| | ||||||||||||| | || || || ||
Sbjct 20982 GATACTATCGAAAACGTCAAAGCAAAGA-TCCAGGACAAGGAAGGCATTCCACCAGATCA 20924
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || || ||||| ||| |||| ||| | || || |||||||||
Sbjct 20923 GCAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGTACATTGTCCGATTATAA 20864
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| || || ||||| || || ||||| |||
Sbjct 20863 TATTCAGAAGGAGTCGACGCTGCACCTGGTTCTT 20830
>seq3785
Length=14585
Score = 87.8 bits (96), Expect = 2e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 57998 AGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGAT 58057
||| |||||||| || || |||||||| |||||||||||| |||| || |||||| | ||
Sbjct 6022 AGGAATATTCTTCTCCGGAAGCTTTGCCGCAATATTTTGGTTGAAAAAGCGCGGCTTAAT 5963
Query 58058 GCCCGGCCTGACGTTTAGCAACGAGTTGATATC 58090
|||||| ||||| |||||| ||| | || ||
Sbjct 5962 GCCCGGTTTGACGCATAGCAATGAGCTAATCTC 5930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445737954531600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |