Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4130 123 2e-23 seq4574 118 9e-22 seq3785 87.8 2e-12 >seq4130 Length=21019 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| ||||||||| |||| || ||||| || || |||| || || | || Sbjct 12055 ATGCAAATTTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTCT 11996 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||||| |||||| | ||| ||||||||||||| | || || || ||| Sbjct 11995 GATACTATCGAAAACGTCAAAGCAAAAATCCAGGACAAGGAAGGCATTCCACCAGATCAG 11936 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| |||| ||| | || || |||||| || Sbjct 11935 CAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGTACATTGTCCGATTACAAT 11876 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || ||||| || || || || ||| Sbjct 11875 ATTCAGAAGGAGTCGACGCTGCACCTAGTTCTT 11843 >seq4574 Length=39733 Score = 118 bits (130), Expect = 9e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| ||||||||| |||| || || || || || | || || || | || Sbjct 21042 ATGCAGATTTTTGTAAAGACTTTGACGGGTAAGACCATAACACTAGAAGTGGAGGCTTCT 20983 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | |||||| |||||| || ||| | ||||||||||||| | || || || || Sbjct 20982 GATACTATCGAAAACGTCAAAGCAAAGA-TCCAGGACAAGGAAGGCATTCCACCAGATCA 20924 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || || ||||| ||| |||| ||| | || || ||||||||| Sbjct 20923 GCAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGTACATTGTCCGATTATAA 20864 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || ||||| || || ||||| ||| Sbjct 20863 TATTCAGAAGGAGTCGACGCTGCACCTGGTTCTT 20830 >seq3785 Length=14585 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 57998 AGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGAT 58057 ||| |||||||| || || |||||||| |||||||||||| |||| || |||||| | || Sbjct 6022 AGGAATATTCTTCTCCGGAAGCTTTGCCGCAATATTTTGGTTGAAAAAGCGCGGCTTAAT 5963 Query 58058 GCCCGGCCTGACGTTTAGCAACGAGTTGATATC 58090 |||||| ||||| |||||| ||| | || || Sbjct 5962 GCCCGGTTTGACGCATAGCAATGAGCTAATCTC 5930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445737954531600