Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4699 87.8 2e-12 >seq4699 Length=50124 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 ||||||||| ||||||||| || | | || |||| |||||| ||||| || |||||| Sbjct 22791 ACCTGAAAACTTCCAGATAAGACATTACGGGTGTATACATTGCTCGTATAAGGCTCAATG 22850 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 |||||||| | | ||| || | || || ||||||||||||||||| | || | Sbjct 22851 CTTTCATTATTGCCAAGTATCTGCGCGGTTGAAGCAGTAGGCATTGGTGCCAATAACACA 22910 Query 37258 CTATTTCT 37265 |||||||| Sbjct 22911 CTATTTCT 22918 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 37514 CATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACG 37573 ||||||| || || |||||||| || || || || | |||| | ||||| |||| || Sbjct 23430 CATCAGCTAAGCCTTGAACACCAATGCCAATCGGACGATGTCTTTTATTGGATCGTTCCG 23489 Query 37574 ATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTT 37633 ||| ||||||||||||||| ||| || | |||||| | ||| ||||||| || || Sbjct 23490 CTTCCGGTACTGGATAATAATTGCGATCAATGACTTTATTCAAATTCTTAACTACTACTT 23549 Query 37634 TCGTAA 37639 |||||| Sbjct 23550 TCGTAA 23555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468494902261200