Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 114 1e-20
seq4574 109 4e-19
>seq4130
Length=21019
Score = 114 bits (126), Expect = 1e-20
Identities = 141/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977
|||||| || | ||||||||||||||||||||| |||| |||| || ||||| |||||
Sbjct 11864 CTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 11923
Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037
|||| |||||| ||||| | || | ||||| || || ||| ||||||| |
Sbjct 11924 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTTTGCTTTGACGTT 11983
Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097
| | || || |||||| || || | ||||| ||||| || || | ||| || ||
Sbjct 11984 TTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTAC 12043
Query 43098 AAAAATTTGCATT 43110
|||||||||||||
Sbjct 12044 AAAAATTTGCATT 12056
>seq4574
Length=39733
Score = 109 bits (120), Expect = 4e-19
Identities = 140/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977
|||||| || | ||| ||||||||||||||||| |||| |||| || ||||| |||||
Sbjct 20851 CTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 20910
Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037
|||| |||||| ||||| | || | ||||| || || |||| ||||||| |
Sbjct 20911 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATCTTTGCTTTGACGTT 20970
Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097
| | || || |||||| || |||| ||||| || || || || | ||| || ||
Sbjct 20971 TTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTACCCGTCAAAGTCTTTAC 21030
Query 43098 AAAAATTTGCATT 43110
|||||| ||||||
Sbjct 21031 AAAAATCTGCATT 21043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381345872256090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |