Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq4130 114 1e-20 seq4574 109 4e-19 >seq4130 Length=21019 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | ||||||||||||||||||||| |||| |||| || ||||| ||||| Sbjct 11864 CTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 11923 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||| |||||| ||||| | || | ||||| || || ||| ||||||| | Sbjct 11924 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTTTGCTTTGACGTT 11983 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | || || |||||| || || | ||||| ||||| || || | ||| || || Sbjct 11984 TTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTAC 12043 Query 43098 AAAAATTTGCATT 43110 ||||||||||||| Sbjct 12044 AAAAATTTGCATT 12056 >seq4574 Length=39733 Score = 109 bits (120), Expect = 4e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | ||| ||||||||||||||||| |||| |||| || ||||| ||||| Sbjct 20851 CTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 20910 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||| |||||| ||||| | || | ||||| || || |||| ||||||| | Sbjct 20911 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATCTTTGCTTTGACGTT 20970 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | || || |||||| || |||| ||||| || || || || | ||| || || Sbjct 20971 TTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTACCCGTCAAAGTCTTTAC 21030 Query 43098 AAAAATTTGCATT 43110 |||||| |||||| Sbjct 21031 AAAAATCTGCATT 21043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381345872256090