Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 140 3e-28
seq4574 122 7e-23
>seq4130
Length=21019
Score = 140 bits (154), Expect = 3e-28
Identities = 154/205 (75%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 18838 GTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTG 18897
||||| ||| |||||||| |||||||||||||| | || ||| |||||||||||||
Sbjct 11852 GTGCAGCGTCGACTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTG 11911
Query 18898 TTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTT 18957
|| |||||| | || |||| ||||||||| || | ||| || ||||| |||||
Sbjct 11912 CTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTT 11971
Query 18958 CTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGT 19017
||| || | ||| |||||| || |||| ||||| || ||||||||||| ||
Sbjct 11972 TGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGT 12031
Query 19018 TAAAGTTTTGACAAAAATTTGCATT 19042
||||| || |||||||||||||||
Sbjct 12032 CAAAGTCTTTACAAAAATTTGCATT 12056
>seq4574
Length=39733
Score = 122 bits (134), Expect = 7e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892
|||| ||||| ||| |||||||| |||||||| ||||| | || ||| ||||||||
Sbjct 20834 ACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCC 20893
Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952
||||| || |||||| | || |||| ||||||||| || | ||| || |||||
Sbjct 20894 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 20953
Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012
|| || ||| || | ||| |||||| || |||| ||| | || ||||| |||
Sbjct 20954 ATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTA 21013
Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042
|| || ||||| || |||||||| ||||||
Sbjct 21014 CCCGTCAAAGTCTTTACAAAAATCTGCATT 21043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414547006446370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |