Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq4130 140 3e-28 seq4574 122 7e-23 >seq4130 Length=21019 Score = 140 bits (154), Expect = 3e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 18838 GTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTG 18897 ||||| ||| |||||||| |||||||||||||| | || ||| ||||||||||||| Sbjct 11852 GTGCAGCGTCGACTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTG 11911 Query 18898 TTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTT 18957 || |||||| | || |||| ||||||||| || | ||| || ||||| ||||| Sbjct 11912 CTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTT 11971 Query 18958 CTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGT 19017 ||| || | ||| |||||| || |||| ||||| || ||||||||||| || Sbjct 11972 TGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGT 12031 Query 19018 TAAAGTTTTGACAAAAATTTGCATT 19042 ||||| || ||||||||||||||| Sbjct 12032 CAAAGTCTTTACAAAAATTTGCATT 12056 >seq4574 Length=39733 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||||| ||| |||||||| |||||||| ||||| | || ||| |||||||| Sbjct 20834 ACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCC 20893 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || |||||| | || |||| ||||||||| || | ||| || ||||| Sbjct 20894 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 20953 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || ||| || | ||| |||||| || |||| ||| | || ||||| ||| Sbjct 20954 ATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTA 21013 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || || ||||| || |||||||| |||||| Sbjct 21014 CCCGTCAAAGTCTTTACAAAAATCTGCATT 21043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414547006446370