Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq4209 93.3 3e-14
seq3175 93.3 3e-14
seq4574 89.7 4e-13
>seq4209
Length=23298
Score = 93.3 bits (102), Expect = 3e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 43982 CCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGT 44041
|||||||| |||||||| ||||| || | |||| |||||||| || ||||| |
Sbjct 2530 CCTGCAAAAATCAACCGCTGCTGATCTGGGGGTATGCCTTCTTTGTCCTGTATTTTCGCT 2589
Query 44042 TTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAA 44101
|| || | ||| ||||| | | || || || | |||||| |||||||| ||||||
Sbjct 2590 TTTACATTCTCAATTGTATCCGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAAA 2649
Query 44102 GTCTTCACAAATATTTGCATG 44122
||||| ||||| |||||||||
Sbjct 2650 GTCTTGACAAAAATTTGCATG 2670
>seq3175
Length=8402
Score = 93.3 bits (102), Expect = 3e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 43982 CCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGT 44041
|||||||| |||||||| ||||| || | |||| |||||||| || ||||| |
Sbjct 5252 CCTGCAAAAATCAACCGCTGCTGATCTGGGGGTATGCCTTCTTTGTCCTGTATTTTCGCT 5193
Query 44042 TTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAA 44101
|| || | ||| ||||| | | || || || | |||||| |||||||| ||||||
Sbjct 5192 TTTACATTCTCAATTGTATCCGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAAA 5133
Query 44102 GTCTTCACAAATATTTGCATG 44122
||||| ||||| |||||||||
Sbjct 5132 GTCTTGACAAAAATTTGCATG 5112
>seq4574
Length=39733
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972
|||| || ||||| ||| || ||||||||||||||| ||| ||| | || |||
Sbjct 20834 ACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCC 20893
Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032
| || || || ||||| |||| || ||||| || | || | ||||| || ||
Sbjct 20894 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 20953
Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092
|| ||| |||||| | | | |||||| | | |||||| || | || || || |||
Sbjct 20954 ATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTA 21013
Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || |||||||| ||||| || |||||
Sbjct 21014 CCCGTCAAAGTCTTTACAAAAATCTGCAT 21042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354755526735540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |