Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq4130 109 5e-19 seq4574 95.1 1e-14 >seq4130 Length=21019 Score = 109 bits (120), Expect = 5e-19 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| ||||| |||||||| | |||| || |||||||||||||||| || | | Sbjct 11864 CTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 11923 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||||| || | | |||||||||| ||||| |||| | || Sbjct 11924 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTT-TGCT---TTGA 11979 Query 48655 CG----CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTT 48710 || | || ||||| | || |||| |||| ||||||||||||||| || | ||| | Sbjct 11980 CGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCT 12039 Query 48711 TCACAAAAATCTGCAT 48726 | |||||||| ||||| Sbjct 12040 TTACAAAAATTTGCAT 12055 >seq4574 Length=39733 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| ||||| || ||||| | |||| || |||||||||||||||| || | | Sbjct 20851 CTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 20910 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||||| || | | |||||||||| || || |||| | || Sbjct 20911 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATCTT-TGCT---TTGA 20966 Query 48655 CG----CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTT 48710 || | || ||||| | || |||| || | ||||||||| ||||| || | ||| | Sbjct 20967 CGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTACCCGTCAAAGTCT 21026 Query 48711 TCACAAAAATCTGCAT 48726 | |||||||||||||| Sbjct 21027 TTACAAAAATCTGCAT 21042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421224990935105