Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 109 5e-19
seq4574 95.1 1e-14
>seq4130
Length=21019
Score = 109 bits (120), Expect = 5e-19
Identities = 143/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| ||||| |||||||| | |||| || |||||||||||||||| || | |
Sbjct 11864 CTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 11923
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | ||||||||||| || | | |||||||||| ||||| |||| | ||
Sbjct 11924 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTT-TGCT---TTGA 11979
Query 48655 CG----CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTT 48710
|| | || ||||| | || |||| |||| ||||||||||||||| || | ||| |
Sbjct 11980 CGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCT 12039
Query 48711 TCACAAAAATCTGCAT 48726
| |||||||| |||||
Sbjct 12040 TTACAAAAATTTGCAT 12055
>seq4574
Length=39733
Score = 95.1 bits (104), Expect = 1e-14
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| ||||| || ||||| | |||| || |||||||||||||||| || | |
Sbjct 20851 CTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 20910
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | ||||||||||| || | | |||||||||| || || |||| | ||
Sbjct 20911 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATCTT-TGCT---TTGA 20966
Query 48655 CG----CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTT 48710
|| | || ||||| | || |||| || | ||||||||| ||||| || | ||| |
Sbjct 20967 CGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTACCCGTCAAAGTCT 21026
Query 48711 TCACAAAAATCTGCAT 48726
| ||||||||||||||
Sbjct 21027 TTACAAAAATCTGCAT 21042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421224990935105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |