Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq4584 192 9e-45
seq3443 192 9e-45
seq4953 93.3 7e-15
>seq4584
Length=40264
Score = 192 bits (212), Expect = 9e-45
Identities = 205/268 (76%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | | || || || ||||| |||||||| || || || |||||
Sbjct 17287 GCGAAGCGTCATCGTAAAGTGCTACGTGACAACATTCAAGGAATAACGAAACCGGCTATT 17346
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||| |||| || |||||||| || |||||| | || |||||| |||||||||| |
Sbjct 17347 CGACGTTTGGCACGACGTGGTGGTGTAAAGCGTATTTCGGGATTGATCTATGAAGAAACA 17406
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|||| ||| ||||| | || | ||| ||||| | ||||||| || || ||| ||
Sbjct 17407 CGTGGTGTACTGAAGGTGTTTTTGGAGAATGTTATACGTGATGCTGTTACA-TATTGTGA 17465
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| ||||| ||||| ||||| | |||||| | |||||||| ||||||||||| ||
Sbjct 17466 GCACGCGAAACGAAAGACGGTCACAGCAATGGATGTTGTCTATGCGTTGAAACGTCAGGG 17525
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | | ||||||||||| |||||
Sbjct 17526 ACGTACGTTGTATGGTTTTGGTGGTTAA 17553
>seq3443
Length=10321
Score = 192 bits (212), Expect = 9e-45
Identities = 205/268 (76%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | | || || || ||||| |||||||| || || || |||||
Sbjct 5745 GCGAAGCGTCATCGTAAAGTGCTACGTGACAACATTCAAGGAATAACGAAACCGGCTATT 5686
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||| |||| || |||||||| || |||||| | || |||||| |||||||||| |
Sbjct 5685 CGACGTTTGGCACGACGTGGTGGTGTAAAGCGTATTTCGGGATTGATCTATGAAGAAACA 5626
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611
|||| ||| ||||| | || | ||| ||||| | ||||||| || || ||| ||
Sbjct 5625 CGTGGTGTACTGAAGGTGTTTTTGGAGAATGTTATACGTGATGCTGTTACA-TATTGTGA 5567
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| ||||| ||||| ||||| | |||||| | |||||||| ||||||||||| ||
Sbjct 5566 GCACGCGAAACGAAAGACGGTCACAGCAATGGATGTTGTCTATGCGTTGAAACGTCAGGG 5507
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | | ||||||||||| |||||
Sbjct 5506 ACGTACGTTGTATGGTTTTGGTGGTTAA 5479
>seq4953
Length=104668
Score = 93.3 bits (102), Expect = 7e-15
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||| ||||| | | ||| || |||||||| ||||| || || ||||| |||||
Sbjct 37486 CGCTAAGCGCCATCGAAAAGTTCTACGTGATAACATTCAAGGTATAACGAAGCCGGCTAT 37427
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||| |||| ||||||||||| || || || | || || | | |||||||| |
Sbjct 37426 TCGTCGTTTGGCACGTCGTGGTGGCGTGAAACGAATTTCAGGTCTCATTTATGAAGAAAC 37367
Query 16552 TCGTGATGTTTTGAAG 16567
||| || ||||||
Sbjct 37366 GCGTAGCGTATTGAAG 37351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79070532462765
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |