Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4699 84.2 3e-11 seq3785 84.2 3e-11 >seq4699 Length=50124 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 62703 AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62762 || || || || || ||||| |||||||||||||| || || || | |||||| ||||| Sbjct 23420 AGGATGAAAGCATCAGCTAAGCCTTGAACACCAATGCCAATCGGACGATGTCTTTTATTG 23479 Query 62763 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62822 || ||| ||||| || | ||||||||||| ||| || | |||||| | ||| | Sbjct 23480 GATCGTTCCGCTTCCGGTACTGGATAATAATTGCGATCAATGACTTTATTCAAATTCTTA 23539 Query 62823 ACAATTACTTT 62833 || | |||||| Sbjct 23540 ACTACTACTTT 23550 >seq3785 Length=14585 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 33012 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33071 ||| ||||| || | ||||||||||||||||||||||||||| |||| | |||||| Sbjct 5168 TTTCTGGTACTCGCTGACACGTTTTTCGAAAAAATTAGTTTTTGCTTCGATCGATATACG 5227 Query 33072 TTCCATGAAATCAAACGGATT 33092 |||||||||||||| || || Sbjct 5228 CTCCATGAAATCAAATGGGTT 5248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622907448181800