Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4130 125 7e-24 seq4574 107 2e-18 >seq4130 Length=21019 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || |||| || | ||||||||||| ||||| ||||||||| | Sbjct 11829 CCACCACGAAGGCGAAGAACTAGGTGCAGCGTCGACTCCTTCTGAATATTGTAATCGGAC 11888 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| || |||| | |||||||| || || || Sbjct 11889 AATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGA 11948 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| |||||| ||| |||| | || | |||||| | | ||| | Sbjct 11949 ATGCCTTCCTTGTCCTGGATTTT-TGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCAC 12007 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||||||||| || | ||| ||||| ||||| ||||| Sbjct 12008 TTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATTTGCAT 12055 >seq4574 Length=39733 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| ||||| || |||||| || || || |||||| ||||||||||| Sbjct 20846 GTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCC 20905 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC-TT 131156 || |||| | |||||||| || || || || ||||| ||||| ||| || ||| || Sbjct 20906 GCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATCTT-TGCTTT 20964 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | |||||| | | ||| | || | || | ||| ||||| || | ||| Sbjct 20965 GACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTACCCGTCAAAGT 21024 Query 131217 TTTTACGAAAATCTGCAT 131234 ||||| ||||||||||| Sbjct 21025 CTTTACAAAAATCTGCAT 21042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471982679683200