Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 125 7e-24
seq4574 107 2e-18
>seq4130
Length=21019
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || |||| || | ||||||||||| ||||| ||||||||| |
Sbjct 11829 CCACCACGAAGGCGAAGAACTAGGTGCAGCGTCGACTCCTTCTGAATATTGTAATCGGAC 11888
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| ||||||||||| || |||| | |||||||| || || ||
Sbjct 11889 AATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGA 11948
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| |||||| ||| |||| | || | |||||| | | ||| |
Sbjct 11949 ATGCCTTCCTTGTCCTGGATTTT-TGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCAC 12007
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||||||||| || | ||| ||||| ||||| |||||
Sbjct 12008 TTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATTTGCAT 12055
>seq4574
Length=39733
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
||||||||||| ||||| || |||||| || || || |||||| |||||||||||
Sbjct 20846 GTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCC 20905
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC-TT 131156
|| |||| | |||||||| || || || || ||||| ||||| ||| || ||| ||
Sbjct 20906 GCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATCTT-TGCTTT 20964
Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216
|| | || | |||||| | | ||| | || | || | ||| ||||| || | |||
Sbjct 20965 GACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTACCCGTCAAAGT 21024
Query 131217 TTTTACGAAAATCTGCAT 131234
||||| |||||||||||
Sbjct 21025 CTTTACAAAAATCTGCAT 21042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471982679683200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |