Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 105 5e-18
seq4574 87.8 1e-12
>seq4130
Length=21019
Score = 105 bits (116), Expect = 5e-18
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || || || || || ||||| |||||||||||| |||||||| | |||| ||
Sbjct 11838 AGGCGAAGAACTAGGTGCAGCGTCGACTCCTTCTGAATATTGTAATCGGACAATGTACGA 11897
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
|||| |||| |||||||| ||||| ||||| ||||||||||| || | || ||
Sbjct 11898 CCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCC 11957
Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCATTCGACCGT 34088
|||||| | ||||||||| | || | | |||||| || || ||||| ||
Sbjct 11958 TTGTCC-TGGATTTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGT 12016
Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
||| ||||| || || | || || ||||| |||||||||
Sbjct 12017 TATGGTTTTACCCGTCAAAGTCTTTACAAAAATTTGCATT 12056
>seq4574
Length=39733
Score = 87.8 bits (96), Expect = 1e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || || ||||| || ||||| |||||||||||| || ||||| | |||| ||
Sbjct 20825 AGGCGAAGAACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGA 20884
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
|||| |||| |||||||| ||||| ||||| ||||||||||| || | || ||
Sbjct 20885 CCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCC 20944
Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCATTCGACCGT 34088
|||||| | | ||||||| | || | | |||||| || || ||| | ||
Sbjct 20945 TTGTCC-TGGATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGT 21003
Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
||| || || || || | || || ||||| || ||||||
Sbjct 21004 TATGGTCTTACCCGTCAAAGTCTTTACAAAAATCTGCATT 21043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397037695894210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |