Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 102 6e-17
seq4574 89.7 4e-13
>seq4130
Length=21019
Score = 102 bits (112), Expect = 6e-17
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCT 15024
||||| || || || || || || || || ||||||||| || ||| || ||||
Sbjct 11846 AACTAGGTGCAGCGTCGACTCCTTCTGAATATTGTAATCG--GACAATGTACGACCGTCC 11903
Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084
|| | || ||||| || | |||| ||||| || || |||||| |||||||||||
Sbjct 11904 TCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCC 11963
Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144
||||| ||| || |||| |||||||| | || || || | || ||||||
Sbjct 11964 TGGATTTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTT 12023
Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
||||| |||| ||| |||||||||||||||||
Sbjct 12024 TTACCCGTCAAAGTCTTTACAAAAATTTGCAT 12055
>seq4574
Length=39733
Score = 89.7 bits (98), Expect = 4e-13
Identities = 146/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATT 15031
|| || || || || || || || || |||||| || ||| || |||| || | |
Sbjct 20840 TGCAGCGTCGACTCCTTCTGAATATTATAATCG--GACAATGTACGACCGTCCTCCAGCT 20897
Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-T 15090
| ||||| || | |||| ||||| || || |||||| ||||||||||| || |
Sbjct 20898 GCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATCT 20957
Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150
|||| ||| || |||| |||||||| | || || |||| || ||||| |||||
Sbjct 20958 TTGC-TTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTACCC 21016
Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176
|||| ||| ||||||||||| |||||
Sbjct 21017 GTCAAAGTCTTTACAAAAATCTGCAT 21042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357369764074925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |