Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq4130 102 6e-17 seq4574 89.7 4e-13 >seq4130 Length=21019 Score = 102 bits (112), Expect = 6e-17 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCT 15024 ||||| || || || || || || || || ||||||||| || ||| || |||| Sbjct 11846 AACTAGGTGCAGCGTCGACTCCTTCTGAATATTGTAATCG--GACAATGTACGACCGTCC 11903 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | || ||||| || | |||| ||||| || || |||||| ||||||||||| Sbjct 11904 TCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCC 11963 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||||| ||| || |||| |||||||| | || || || | || |||||| Sbjct 11964 TGGATTTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTT 12023 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| |||| ||| ||||||||||||||||| Sbjct 12024 TTACCCGTCAAAGTCTTTACAAAAATTTGCAT 12055 >seq4574 Length=39733 Score = 89.7 bits (98), Expect = 4e-13 Identities = 146/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATT 15031 || || || || || || || || || |||||| || ||| || |||| || | | Sbjct 20840 TGCAGCGTCGACTCCTTCTGAATATTATAATCG--GACAATGTACGACCGTCCTCCAGCT 20897 Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-T 15090 | ||||| || | |||| ||||| || || |||||| ||||||||||| || | Sbjct 20898 GCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATCT 20957 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 |||| ||| || |||| |||||||| | || || |||| || ||||| ||||| Sbjct 20958 TTGC-TTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTACCC 21016 Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| ||| ||||||||||| ||||| Sbjct 21017 GTCAAAGTCTTTACAAAAATCTGCAT 21042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357369764074925