Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 91.5 2e-13
seq4574 86.0 7e-12
>seq4130
Length=21019
Score = 91.5 bits (100), Expect = 2e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || |||||||| ||||| | || || |||| || ||||||||||| || ||
Sbjct 11864 CTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 11923
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||| || | || | || ||||||||| ||| || |||| |
Sbjct 11924 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTTTGCTTTGACGTT 11983
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || || | ||||| || | || |||||||| ||||||| || || ||
Sbjct 11984 TTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTAC 12043
Query 46582 AAAGATTTGCATT 46594
||| |||||||||
Sbjct 12044 AAAAATTTGCATT 12056
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 46454 CCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTC 46513
|| ||||| ||||| ||||||||||| | || | | |||||||||| ||| ||| |
Sbjct 12896 CCCGCGAAGATCAATCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGGATTTTCGCC 12955
Query 46514 TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573
|| | || | | ||||| | |||||| |||| ||||| ||||| || || ||
Sbjct 12956 TTAACATTCTCGATGGTGTCAGATGCTTCCACTTCCAATGTGATTGTTTTACCAGTAAGA 13015
Query 46574 GTTTTAACAAAGATTTGCAT 46593
||||||||||||||||||||
Sbjct 13016 GTTTTAACAAAGATTTGCAT 13035
>seq4574
Length=39733
Score = 86.0 bits (94), Expect = 7e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| |||| || |||||| || ||||| || ||||| | || || |||| ||
Sbjct 20834 ACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCC 20893
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| || || |||| |||||||| || | || | || ||||||||| |
Sbjct 20894 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 20953
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| |||| | | | || || | ||||| || | || ||||| ||
Sbjct 20954 ATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTA 21013
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
||||||| || || ||||| || ||||||
Sbjct 21014 CCCGTCAAAGTCTTTACAAAAATCTGCATT 21043
Score = 86.0 bits (94), Expect = 7e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 46454 CCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTC 46513
|| ||||| ||||| ||||||||||| | ||| | | |||||||||| ||| || |
Sbjct 21884 CCCGCGAAGATCAATCGCTGCTGGTCTGGCGGAATTCCCTCCTTGTCCTGGATTTTTGCC 21943
Query 46514 TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573
|| | || | | || || | |||||| |||| ||||| ||||| || || ||
Sbjct 21944 TTAACATTCTCGATGGTATCAGATGCTTCCACTTCCAATGTGATTGTTTTACCGGTAAGA 22003
Query 46574 GTTTTAACAAAGATTTGCAT 46593
||||||||||||||||||||
Sbjct 22004 GTTTTAACAAAGATTTGCAT 22023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565202330724600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |