Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq4026 161 4e-34
seq5105 150 7e-31
seq4864 91.5 6e-13
seq4574 91.5 6e-13
>seq4026
Length=18768
Score = 161 bits (178), Expect = 4e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291
||||| || || ||||| || |||||| | ||||||||| |||||||| |||| ||
Sbjct 9836 AAAACCTTCGCACCTGAGGAGATTTCAGCAATGGTTCTTGGCAAAATGAAGGAAATTGCG 9777
Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351
||| |||| | || ||| | ||||||| |||| || || ||||| || |||
Sbjct 9776 GAAGCATATCTAGGAAAGGAAGTAAAACATGCAGTCGTTACGGTACCTGCTTACTTTAAT 9717
Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411
||||||||||| ||||| || ||||||||||| |||||| ||| | |||||| ||||
Sbjct 9716 GATGCACAACGTCAAGCTACCAAAGATGCAGGTACTATTGCCGGTCTCAATGTTGTTCGT 9657
Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450
|| || |||||||||||||| || ||| | |||||||||
Sbjct 9656 ATCATCAATGAACCTACAGCTGCCGCTATTGCATATGGA 9618
Score = 89.7 bits (98), Expect = 2e-12
Identities = 161/236 (68%), Gaps = 6/236 (3%)
Strand=Plus/Minus
Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050
||||| ||||||||||| ||||||||||| |||||||| || | | || | |||
Sbjct 8464 AATCCAGATGAAGCTGTGGCATATGGTGCAGCAGTTCAGGCTGGTGTTAT------TTCG 8411
Query 452051 GATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTT 452110
| ||| |||| || || ||| | || ||||||| | ||| | | ||||| ||
Sbjct 8410 GGTGAAGAAAGTACTGGTGACATTGTATTGTTAGATGTGAATCCTTTGACCCTTGGTATT 8351
Query 452111 GAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAA 452170
|||||| ||| || | ||||| || | ||| | || ||| ||||||| ||
Sbjct 8350 GAAACAATTGGCGGTGTTATGACCAAACTCATTCAGAGAAACACTGTTATTCCTACCAAG 8291
Query 452171 AAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGT 452226
|||||||| | || ||| ||| ||||||||| ||| || ||||| || ||
Sbjct 8290 AAGAGTCAGATTTTCTCTACGGCAGCTGATAACCAGCCAACAGTCACTATCCAGGT 8235
>seq5105
Length=689533
Score = 150 bits (166), Expect = 7e-31
Identities = 173/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276
|| || ||||| || || || ||| |||| ||||| ||||| || |||||| | ||||
Sbjct 52997 TACAAGGGTGAGACAAAGACCTTTACTCCAGAAGAGATTTCGTCGATGGTTTTGGTTAAA 52938
Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336
||||| || || || ||| | | | ||| | | || | ||||| || ||||| ||
Sbjct 52937 ATGAAGGAGACGGCTGAAGCTTTTCTGGGTCATGCGGTCAAGGATGCTGTTATTACAGTC 52878
Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396
||||| ||||| ||||| |||| || ||||| ||||||||| | || |||||||||
Sbjct 52877 CCCGCATATTTTAATGACTCACAGCGACAAGCCACTAAAGATTCCGGTGCAATTGCTGGT 52818
Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
||||||| | || ||||| || ||||| |||||||||||| | || |||||
Sbjct 52817 CTAAATGTCTTGCGTATTATCAACGAACCAACAGCAGCTGCTATTGCTTATGG 52765
Score = 125 bits (138), Expect = 3e-23
Identities = 136/178 (76%), Gaps = 2/178 (1%)
Strand=Plus/Minus
Query 452315 CCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTT 452374
|| ||||| ||| | || | |||| ||||||||||||||||||| ||||| ||||
Sbjct 56340 CCACAAATCGAAGTAACGTTTGATATTGATGCAAATGGTATTCTGAATGTCTCTGCACAA 56281
Query 452375 GAAAAATCATCTGGAAAATCAGAAAAA-ATTACAATTACTAATGATAAAAACCGTTTATC 452433
|| ||||| | || || || || || || ||||||||||| || ||| |||||| ||
Sbjct 56280 GATAAATCCACAGGCAAG-CACAATAAGATAACAATTACTAACGACAAAGGCCGTTTGTC 56222
Query 452434 TAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491
|| || || || |||| ||||||| | ||||| ||||||| ||||| |||||| |||
Sbjct 56221 AAAGGACGAAATCGAAAGAATGGTACAGGAAGCTGAAAAATACAAGGCTGATGACGAA 56164
Score = 123 bits (136), Expect = 1e-22
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378
||||| ||| | ||||| || || |||||||| ||| | |||||||||||||||||||||
Sbjct 57867 GATGCCGTAGTAACTGTGCCAGCATATTTCAACGATTCCCAACGGCAAGCAACTAAAGAT 57808
Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438
||||| |||||||| | || ||||||||||| || |||||||| || || ||||||
Sbjct 57807 GCAGGTGCCATTGCTGGCCTGAACGTTCTTCGAATCATCAATGAACCAACCGCTGCTGCT 57748
Query 451439 CTAGCATATGGACTAG 451454
| || || || ||||
Sbjct 57747 ATTGCGTACGGTCTAG 57732
Score = 86.0 bits (94), Expect = 2e-11
Identities = 114/158 (72%), Gaps = 14/158 (9%)
Strand=Plus/Minus
Query 452003 GCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT------TCAGATGAT 452056
||||| || |||||||||||||| |||||||| ||| || |||| || |||| |
Sbjct 56751 GCTGTAGCTTATGGTGCTGCAGTGCAAGCAGCAATTTTATCAGGCGATAAATCGGATGCT 56692
Query 452057 GAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACA 452116
| | || ||| | || ||| | ||||| |||| ||||| || || | ||||||
Sbjct 56691 GTACAA------GATTTACTATTATTGGATGTTGCACCACTATCACTGGGTATCGAAACA 56638
Query 452117 GCTGGTGGAATGATGACTAATTTAATTAAACGAGGAAC 452154
|||||||| |||||||| ||||| ||| ||||||
Sbjct 56637 GCTGGTGGTGTGATGACTGCGTTAATAAAA--AGGAAC 56602
>seq4864
Length=78114
Score = 91.5 bits (100), Expect = 6e-13
Identities = 65/74 (88%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| ||||||||||||| ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 47832 GCCTTCTTAGCTCAGTTGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 47889
Query 509566 GTCCCACATAAGGC 509579
|||||||| | |||
Sbjct 47890 GTCCCACAGAGGGC 47903
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 510741 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 510800
||||| ||||||||||||| ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 47832 GCCTTCTTAGCTCAGTTGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 47889
Query 510801 ATCCCACATAAGGC 510814
||||||| | |||
Sbjct 47890 GTCCCACAGAGGGC 47903
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 511655 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 511714
||||| ||||||||||||| ||||||| ||| ||||||| |||| ||||||||||||||
Sbjct 47832 GCCTTCTTAGCTCAGTTGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGA 47889
Query 511715 ATCCCACATAAGGC 511728
||||||| | |||
Sbjct 47890 GTCCCACAGAGGGC 47903
>seq4574
Length=39733
Score = 91.5 bits (100), Expect = 6e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| |||||||||||||| ||||| || |||||||| || || | ||
Sbjct 22347 ATGCAAATCTTCGTGAAAACACTGACTGGAAAAACAATCACTCTTGAAGTGGAGGCTTCA 22288
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | ||||| |||||| ||||| ||||| || || || || || ||
Sbjct 22287 GACACAATTGAAAATGTTAAAGCAAAAATACAAGACAAGGAGGGTATCCCGCCAGACCAG 22228
Query 391170 CAACGTTTAATTTTCTCAGG 391189
|| || | ||||| ||||
Sbjct 22227 CAGCGCCTTATTTTTGCAGG 22208
Score = 86.0 bits (94), Expect = 2e-11
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| || || || |||| ||||| || || || || || || || | ||
Sbjct 21043 AATGCAGATTTTTGTAAAGACTTTGACGGGTAAGACCATAACACTAGAAGTGGAGGCTTC 20984
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || ||| | ||| ||| || || || |||||||| ||||| || |||||
Sbjct 20983 TGATACTATCGAAAACGTCAAAGCAAAGATCCAGGACAAGGAAGGCATTCCACCAGATCA 20924
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|| || | || || | || || || || || || || | || ||| | ||||||||
Sbjct 20923 GCAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGTACATTGTCCGATTATAA 20864
Query 391229 TATTGATAAGGATGCAACACTTCAC 391253
|||| | ||||| | || || |||
Sbjct 20863 TATTCAGAAGGAGTCGACGCTGCAC 20839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975589172581340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |