Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq4574 134 1e-26
seq4130 132 4e-26
seq4977 84.2 2e-11
>seq4574
Length=39733
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| || ||||| ||| || |||||||| ||||| || | | ||| |||| |||
Sbjct 20834 ACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCC 20893
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| || ||||| ||||||||||| ||||| | |||| ||| ||||||||
Sbjct 20894 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 20953
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
|||||| ||| || | | || || || |||||||| || | || || || ||
Sbjct 20954 ATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTA 21013
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||||||||| |||||||||||||||||
Sbjct 21014 CCCGTCAAAGTCTTTACAAAAATCTGCAT 21042
>seq4130
Length=21019
Score = 132 bits (146), Expect = 4e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| ||||| ||| || |||||||||||||| || | | ||| |||| |||| ||||
Sbjct 11853 TGCAGCGTCGACTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGC 11912
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683
|| || ||||| ||||||||||| ||||| | |||| ||| |||||||| || |||
Sbjct 11913 TTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTTT 11972
Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743
||| || | | || || || |||||||| || | || || ||||| ||||||
Sbjct 11973 GCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTC 12032
Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766
||||| ||||||||||| |||||
Sbjct 12033 AAAGTCTTTACAAAAATTTGCAT 12055
>seq4977
Length=116087
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 9141 ATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATCACACCAGCACCCAC 9200
|||||| |||||||| | | || ||||||||||||| ||| | || || ||||| ||
Sbjct 101059 ATTGAAAAGCACCACACTGAGGTGACCCCTGTAATCCGAATCAACAACTCCGGCACCTAC 101118
Query 9201 GTCGATGAAGTGCTTGACCGCTAGTCCAGAGCGGGGCGCGATTCGACCGTA 9251
|| ||||| ||||| || || || || ||||| ||||| |||| ||| ||
Sbjct 101119 ATCAATGAAATGCTTCACAGCAAGACCTGAGCGTGGCGCTATTCTACCATA 101169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380913899133915
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |