Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq4574 134 1e-26 seq4130 132 4e-26 seq4977 84.2 2e-11 >seq4574 Length=39733 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || ||||| ||| || |||||||| ||||| || | | ||| |||| ||| Sbjct 20834 ACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCC 20893 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| ||||||||||| ||||| | |||| ||| |||||||| Sbjct 20894 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 20953 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| ||| || | | || || || |||||||| || | || || || || Sbjct 20954 ATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTA 21013 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||||||| ||||||||||||||||| Sbjct 21014 CCCGTCAAAGTCTTTACAAAAATCTGCAT 21042 >seq4130 Length=21019 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || |||||||||||||| || | | ||| |||| |||| |||| Sbjct 11853 TGCAGCGTCGACTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGC 11912 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| ||||||||||| ||||| | |||| ||| |||||||| || ||| Sbjct 11913 TTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTTT 11972 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 ||| || | | || || || |||||||| || | || || ||||| |||||| Sbjct 11973 GCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTC 12032 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 ||||| ||||||||||| ||||| Sbjct 12033 AAAGTCTTTACAAAAATTTGCAT 12055 >seq4977 Length=116087 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 9141 ATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATCACACCAGCACCCAC 9200 |||||| |||||||| | | || ||||||||||||| ||| | || || ||||| || Sbjct 101059 ATTGAAAAGCACCACACTGAGGTGACCCCTGTAATCCGAATCAACAACTCCGGCACCTAC 101118 Query 9201 GTCGATGAAGTGCTTGACCGCTAGTCCAGAGCGGGGCGCGATTCGACCGTA 9251 || ||||| ||||| || || || || ||||| ||||| |||| ||| || Sbjct 101119 ATCAATGAAATGCTTCACAGCAAGACCTGAGCGTGGCGCTATTCTACCATA 101169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380913899133915