Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq4130 104 2e-17 seq4574 95.1 1e-14 >seq4130 Length=21019 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| |||||||| || || |||||||||||||| || |||| ||| |||| Sbjct 12056 AATGCAAATTTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTC 11997 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | |||| ||||||| ||||| || || | || |||||| Sbjct 11996 TGATACTATCGAAAACGTCAAAGCAAAAATCCAGGACAAGGAAGGCATTCCACCAGATCA 11937 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| |||| |||||||||||||| || |||| || | || || ||||||| || Sbjct 11936 GCAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGTACATTGTCCGATTACAA 11877 Query 28733 CATTCAAAAAGAATCTACTCTGCAC 28757 ||||| || || || || |||||| Sbjct 11876 TATTCAGAAGGAGTCGACGCTGCAC 11852 >seq4574 Length=39733 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || |||||||| || || |||||||| ||||| || ||| ||| |||| Sbjct 21043 AATGCAGATTTTTGTAAAGACTTTGACGGGTAAGACCATAACACTAGAAGTGGAGGCTTC 20984 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | |||| ||| ||| ||||| || || | || |||||| Sbjct 20983 TGATACTATCGAAAACGTCAAAGCAAAGATCCAGGACAAGGAAGGCATTCCACCAGATCA 20924 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| |||| |||||||||||||| || |||| || | || || |||||||||| Sbjct 20923 GCAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGTACATTGTCCGATTATAA 20864 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || || || |||||| |||| Sbjct 20863 TATTCAGAAGGAGTCGACGCTGCACCTGGT 20834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425378332509795