Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq4574 105 1e-17
seq4130 105 1e-17
seq4330 100 5e-16
>seq4574
Length=39733
Score = 105 bits (116), Expect = 1e-17
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 193218 TTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTG 193277
|| || |||||||| | | ||| ||||| ||||| || ||||||||||| || || |||
Sbjct 21535 TTACCAGCAAAAATGAGGCGCTGCTGATCCGGAGGAATCCCTTCTTTATCCTGAATCTTG 21594
Query 193278 GTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTT 193337
| || | |||| || ||||| |||| ||||||||||| || || || || || ||
Sbjct 21595 GCCTTCACATTTTCGATTGTATCAGAAGCCTCAACTTCTAAGGTGATCGTCTTGCCCGTC 21654
Query 193338 AGCGTTTTTACAAATATTTGCAT 193360
| ||||||||||| ||||||||
Sbjct 21655 AATGTTTTTACAAAAATTTGCAT 21677
Score = 96.9 bits (106), Expect = 6e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280
|| |||||||| | | ||| || || || || || || || || ||||||||||| | |
Sbjct 22208 CCTGCAAAAATAAGGCGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGTATTTTTGCT 22267
Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340
|| | |||| ||| || || |||| ||| ||||| ||||| || ||||| || || ||
Sbjct 22268 TTAACATTTTCAATTGTGTCTGAAGCCTCCACTTCAAGAGTGATTGTTTTTCCAGTCAGT 22327
Query 193341 GTTTTTACAAATATTTGCATTTT 193363
||||| || || |||||||| ||
Sbjct 22328 GTTTTCACGAAGATTTGCATGTT 22350
>seq4130
Length=21019
Score = 105 bits (116), Expect = 1e-17
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 193218 TTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTG 193277
|| || |||||||| | | ||| ||||| ||||| || ||||||||||| || || |||
Sbjct 12548 TTACCAGCAAAAATAAGGCGCTGCTGATCCGGAGGGATCCCTTCTTTATCCTGAATCTTG 12607
Query 193278 GTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTT 193337
| |||| |||| || || || |||| ||||||||||| || || || || || ||
Sbjct 12608 GCCTTTACATTTTCGATTGTGTCAGAAGCCTCAACTTCTAAGGTGATCGTCTTGCCCGTC 12667
Query 193338 AGCGTTTTTACAAATATTTGCAT 193360
| ||||||||||| ||||||||
Sbjct 12668 AATGTTTTTACAAAAATTTGCAT 12690
Score = 100 bits (110), Expect = 5e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280
|| |||||||| | | ||| || || || || || || || || ||||||||||| | |
Sbjct 13216 CCTGCAAAAATAAGGCGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGTATTTTTGCT 13275
Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340
|| | |||| ||| || || |||| ||| || || ||||| || || || || ||||||
Sbjct 13276 TTAACATTTTCAATTGTGTCTGAAGCCTCCACCTCAAGAGTGATCGTCTTTCCAGTTAGC 13335
Query 193341 GTTTTTACAAATATTTGCATTTT 193363
||||| ||||| |||||||| ||
Sbjct 13336 GTTTTCACAAAGATTTGCATGTT 13358
>seq4330
Length=27005
Score = 100 bits (110), Expect = 5e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280
|| |||||||| | || || |||||||| || || || || ||||| || ||||| ||
Sbjct 21274 CCTGCAAAAATAAGTCGTTGCTGATCAGGTGGAATACCCTCCTTATCCTGAATTTTAGTC 21215
Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340
|| | ||| |||||||||||| || || || || || || || || || || |||| |
Sbjct 21214 TTCACATTCTCAATAGTATCGGACGATTCTACCTCAAGGGTAATCGTCTTTCCAGTTAAC 21155
Query 193341 GTTTTTACAAATATTTGCATTTT 193363
||||| |||||||| ||||| ||
Sbjct 21154 GTTTTCACAAATATCTGCATCTT 21132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899596990803600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |