Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4130 109 5e-19 seq4574 100 2e-16 >seq4130 Length=21019 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| || ||||| || || |||||||| || ||||| |||| || Sbjct 12056 AATGCAAATTTTTGTAAAGACTTTGACGGGTAAAACCATAACACTCGAAGTGGAGGCTTC 11997 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| ||| | || ||| || || ||||| |||||| | || ||||| Sbjct 11996 TGATACTATCGAAAACGTCAAAGCAAAAATCCAGGACAAGGAAGGCATTCCACCAGATCA 11937 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || |||| || | |||||| || ||||||||||| | | ||| || | |||||||| Sbjct 11936 GCAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGTACATTGTCCGATTACAA 11877 Query 110452 CATTCAAAAAGAATCTACGTTGCAC 110476 ||||| || || || ||| ||||| Sbjct 11876 TATTCAGAAGGAGTCGACGCTGCAC 11852 >seq4574 Length=39733 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||| || ||||| || || || ||||| || | ||| |||| || Sbjct 21043 AATGCAGATTTTTGTAAAGACTTTGACGGGTAAGACCATAACACTAGAAGTGGAGGCTTC 20984 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| ||| | || ||| ||||| ||||| |||||| | || ||||| Sbjct 20983 TGATACTATCGAAAACGTCAAAGCAAAGATCCAGGACAAGGAAGGCATTCCACCAGATCA 20924 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || |||| || | |||||| || ||||||||||| | | ||| || | ||||| || Sbjct 20923 GCAGCGACTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGTACATTGTCCGATTATAA 20864 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| || || || ||| ||||| |||| Sbjct 20863 TATTCAGAAGGAGTCGACGCTGCACCTGGT 20834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412815914156765