Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq4864 86.0 1e-11 seq4450 84.2 4e-11 seq4099 84.2 4e-11 >seq4864 Length=78114 Score = 86.0 bits (94), Expect = 1e-11 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 |||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 47838 TTAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 47895 >seq4450 Length=32089 Score = 84.2 bits (92), Expect = 4e-11 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 8277 TAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 8221 >seq4099 Length=20294 Score = 84.2 bits (92), Expect = 4e-11 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 9226 TAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 9282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825864096184200