Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4574 125 5e-24 seq4130 113 3e-20 >seq4574 Length=39733 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | || |||||||||||| ||||| || || | | || | || Sbjct 20831 AGAACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCC 20890 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || ||||||||||| ||||| ||| | || | || |||||||| Sbjct 20891 TCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCC 20950 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||||||| | | || | ||| ||||| || || | ||||||||| Sbjct 20951 TGGATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTC 21010 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| | ||||||||||| |||||||| Sbjct 21011 TTACCCGTCAAAGTCTTTACAAAAATCTGCAT 21042 >seq4130 Length=21019 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| || || || || | | || | || ||||| ||||| || || || Sbjct 11864 CTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 11923 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||||||| ||||| ||| | || | || |||||||| | |||||| ||||||| Sbjct 11924 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTTTGCTTTGACGTT 11983 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| ||||| || || | |||||||| || ||||| | |||||||| Sbjct 11984 TTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTAC 12043 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 12044 AAAAATTTGCAT 12055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325672536309995