Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq4330 109 9e-19
seq4574 84.2 3e-11
seq4209 84.2 3e-11
seq3175 84.2 3e-11
>seq4330
Length=27005
Score = 109 bits (120), Expect = 9e-19
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| ||||| | ||||| ||||| ||||| || ||||| |||| |||||| ||
Sbjct 21136 TGCAGATATTTGTGAAAACGTTAACTGGAAAGACGATTACCCTTGAGGTAGAATCGTCCG 21195
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| | ||||| || | |||||| || ||| || || |||||||| ||||| |
Sbjct 21196 ATACTATTGAGAATGTGAAGACTAAAATTCAGGATAAGGAGGGTATTCCACCTGATCAGC 21255
Query 146152 AAAGACTCATTTTTGCAGGT 146171
|| |||| ||||||||||||
Sbjct 21256 AACGACTTATTTTTGCAGGT 21275
>seq4574
Length=39733
Score = 84.2 bits (92), Expect = 3e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | |||||| | || ||||||||||| ||| |||| || || | |
Sbjct 22346 TGCAAATCTTCGTGAAAACACTGACTGGAAAAACAATCACTCTTGAAGTGGAGGCTTCAG 22287
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| ||||||| ||| ||||||||| || || || || || || || || |
Sbjct 22286 ACACAATTGAAAATGTTAAAGCAAAAATACAAGACAAGGAGGGTATCCCGCCAGACCAGC 22227
Query 146152 AAAGACTCATTTTTGCAGGTA 146172
| | || |||||||||||||
Sbjct 22226 AGCGCCTTATTTTTGCAGGTA 22206
>seq4209
Length=23298
Score = 84.2 bits (92), Expect = 3e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || ||||| || ||||| ||||| |||| || ||| |
Sbjct 2668 TGCAAATTTTTGTCAAGACTTTAACTGGTAAAACGATTACGCTTGAGGTCGAATCCTCGG 2609
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||||||| |||||||| ||||||||||| || || ||||| |
Sbjct 2608 ATACAATTGAGAATGTAAAAGCGAAAATACAGGACAAAGAAGGCATACCCCCAGATCAGC 2549
Query 146152 AAAGACTCATTTTTGCAGGTA 146172
| | | |||||||||||||
Sbjct 2548 AGCGGTTGATTTTTGCAGGTA 2528
>seq3175
Length=8402
Score = 84.2 bits (92), Expect = 3e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || ||||| || ||||| ||||| |||| || ||| |
Sbjct 5114 TGCAAATTTTTGTCAAGACTTTAACTGGTAAAACGATTACGCTTGAGGTCGAATCCTCGG 5173
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||||||| |||||||| ||||||||||| || || ||||| |
Sbjct 5174 ATACAATTGAGAATGTAAAAGCGAAAATACAGGACAAAGAAGGCATACCCCCAGATCAGC 5233
Query 146152 AAAGACTCATTTTTGCAGGTA 146172
| | | |||||||||||||
Sbjct 5234 AGCGGTTGATTTTTGCAGGTA 5254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786116232756600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |