Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq4330 104 2e-17
seq4574 100 2e-16
>seq4330
Length=27005
Score = 104 bits (114), Expect = 2e-17
Identities = 111/144 (77%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT 29706
|| ||| | || | || ||||||||| || ||||||||||| || || || |||||| ||
Sbjct 21274 CCTGCAAAAATAAGTCGTTGCTGATCAGGTGGAATACCCTCCTTATCCTG-AATTTTAGT 21216
Query 29707 -TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAA 29765
|| ||| | || | ||| || || |||||| ||||| || || || || ||||||||
Sbjct 21215 CTTCACATTCTCAATAGTATCGGACGATTCTACCTCAAGGGTAATCGTCTTTCCAGTTAA 21156
Query 29766 GGTTTTAACAAATATCTGCATTTT 29789
||||| |||||||||||||| ||
Sbjct 21155 CGTTTTCACAAATATCTGCATCTT 21132
>seq4574
Length=39733
Score = 100 bits (110), Expect = 2e-16
Identities = 101/130 (78%), Gaps = 1/130 (1%)
Strand=Plus/Plus
Query 29665 TGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTG 29724
||||| || ||||| |||||||| |||||||||| |||| ||| ||| |||| | |||
Sbjct 22226 TGCTGGTCTGGCGGGATACCCTCCTTGTCTTGTATTTTTGCTTTAACATTTTCAATTGTG 22285
Query 29725 TCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGC 29784
|| ||| || ||||||||||| || ||||| ||||| | ||||| || || || |||
Sbjct 22286 TCTGAAGCCTCCACTTCAAGAGTGATTGTTTTTCCAGTCAGTGTTTTCACGAAGATTTGC 22345
Query 29785 AT-TTTAAAA 29793
|| |||| ||
Sbjct 22346 ATGTTTACAA 22355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385195232744805
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |