Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4130 127 2e-24 seq4574 120 3e-22 >seq4130 Length=21019 Score = 127 bits (140), Expect = 2e-24 Identities = 151/200 (76%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| |||||||||||| || || |||| |||||| |||||||||| Sbjct 11859 GTCGACTCCTTCTGAATATTGTAATCGGACA--ATGTACGACCGTCCTCCAGCTGCTTGC 11916 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 |||| | || || |||||||| || || || |||||||||||||| ||| |||||| Sbjct 11917 CCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGAT-TTTTGCT 11975 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | || || | | |||||| |||| || | |||||| || |||| | Sbjct 11976 TTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAA 12035 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || ||||| ||||| ||||| Sbjct 12036 GTCTTTACAAAAATTTGCAT 12055 >seq4574 Length=39733 Score = 120 bits (132), Expect = 3e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| ||||| |||||| || || |||| |||||| |||||||||| Sbjct 20846 GTCGACTCCTTCTGAATATTATAATCGGACAATGT--ACGACCGTCCTCCAGCTGCTTGC 20903 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 |||| | || || |||||||| || || || |||||||||||||| ||||||| | Sbjct 20904 CCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATCTTTGCTT 20963 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | || || | | |||||| || | || | ||| || || |||| || Sbjct 20964 TGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTACCCGTCAAAG 21023 Query 133642 TTTTTACGAAAATCTGCAT 133660 | ||||| ||||||||||| Sbjct 21024 TCTTTACAAAAATCTGCAT 21042 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC- 133586 |||| || ||||||||||| || ||||| || |||||||| || |||||||| | | Sbjct 22215 AAATAAGGCGCTGCTGGTCTGGCGGGATACCCTCCTTGTC-TTGTATTTTTGCTTTAACA 22273 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | |||| ||||| | | |||||| || | |||| ||||| || ||||| ||||| Sbjct 22274 TTTTCAATTGTGTCTGAAGCCTCCACTTCAAGAGTGATTGTTTTTCCAGTCAGTGTTTTC 22333 Query 133647 ACGAAAATCTGCATG 133661 ||||| || |||||| Sbjct 22334 ACGAAGATTTGCATG 22348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483389951710200