Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 129 5e-25
seq4574 127 2e-24
>seq4130
Length=21019
Score = 129 bits (142), Expect = 5e-25
Identities = 147/195 (75%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||| |||||||||| ||| || || |||| ||||||||||| ||||||||
Sbjct 11864 CTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAA 11923
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663
|||| |||||||| || | |||| || ||||||||| ||| |||||| || |
Sbjct 11924 GATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGAT-TTTTGCTTTGACGT 11982
Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | || || | ||||| || | || || ||||||||||||||||| || |
Sbjct 11983 TTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTA 12042
Query 35724 CAAATATCTGCATTC 35738
|||| || |||||||
Sbjct 12043 CAAAAATTTGCATTC 12057
Score = 86.0 bits (94), Expect = 6e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 35595 TACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTT 35654
||||||| || ||||| ||||||||||| | |||| | |||||||||| ||| ||
Sbjct 12894 TACCCGCGAAGATCAATCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGGATTTTCG 12953
Query 35655 GCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
||| | | | | | ||||| | |||||| |||| ||||| |||||||| || |
Sbjct 12954 CCTTAACATTCTCGATGGTGTCAGATGCTTCCACTTCCAATGTGATTGTTTTACCAGTAA 13013
Query 35715 AAGTTTTCACAAATATCTGCAT 35736
|||||| ||||| || |||||
Sbjct 13014 GAGTTTTAACAAAGATTTGCAT 13035
>seq4574
Length=39733
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568
||||||||| | | | |||| || | ||| |||||| ||||| || |||||||
Sbjct 20815 TCCACCACGAAGGCGAAGAACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGA 20874
Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
||| || || |||| ||||||||||| |||||||| |||| |||||||| || | ||
Sbjct 20875 CAATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGG 20934
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
|| || ||||||||| ||||||| || | || | | || || | |||||
Sbjct 20935 AATGCCTTCCTTGTCCTGGATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCAC 20994
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| | || || || |||||||||||||| || ||||| ||||||||||
Sbjct 20995 TTCTAGTGTTATGGTCTTACCCGTCAAAGTCTTTACAAAAATCTGCATTC 21044
Score = 86.0 bits (94), Expect = 6e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 35595 TACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTT 35654
||||||| || ||||| ||||||||||| | |||| | |||||||||| ||| |||
Sbjct 21882 TACCCGCGAAGATCAATCGCTGCTGGTCTGGCGGAATTCCCTCCTTGTCCTGGATTTTTG 21941
Query 35655 GCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
||| | | | | | || || | |||||| |||| ||||| |||||||| || |
Sbjct 21942 CCTTAACATTCTCGATGGTATCAGATGCTTCCACTTCCAATGTGATTGTTTTACCGGTAA 22001
Query 35715 AAGTTTTCACAAATATCTGCAT 35736
|||||| ||||| || |||||
Sbjct 22002 GAGTTTTAACAAAGATTTGCAT 22023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450764833733400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |