Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4130 145 8e-30
seq4209 127 2e-24
seq3175 127 2e-24
seq4574 122 9e-23
seq4330 86.0 6e-12
>seq4130
Length=21019
Score = 145 bits (160), Expect = 8e-30
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| ||||| || ||||| ||||| ||||| ||| | || || ||| ||
Sbjct 11847 ACTAGGTGCAGCGTCGACTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCC 11906
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| ||||| |||| ||||||||||| || || |||||||| || || ||
Sbjct 11907 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 11966
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|||||| |||||| || | || || || | ||||| ||||| || |||||||||
Sbjct 11967 ATTTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTA 12026
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || ||||| || || ||||||||||||
Sbjct 12027 CCCGTCAAAGTCTTTACAAAAATTTGCATT 12056
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
||||||||||| | |||||||| || ||||| || || || || ||||| |||||| |
Sbjct 13216 CCTGCAAAAATAAGGCGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGTATTTTTGCT 13275
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | |||||| || | ||||| || ||||| || || || || ||||
Sbjct 13276 TTAACATTTTCAATTGTGTCTGAAGCCTCCACCTCAAGAGTGATCGTCTTTCCAGTTAGC 13335
Query 134694 GTTTTAACGAAAATTTGCATTTT 134716
||||| || || |||||||| ||
Sbjct 13336 GTTTTCACAAAGATTTGCATGTT 13358
>seq4209
Length=23298
Score = 127 bits (140), Expect = 2e-24
Identities = 112/140 (80%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|||||||||||||| ||||||||||| || |||||||||||||| || || ||||| |
Sbjct 2530 CCTGCAAAAATCAACCGCTGCTGATCTGGGGGTATGCCTTCTTTGTCCTGTATTTTCGCT 2589
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || || ||||| || || || ||||| |||||||| ||||||
Sbjct 2590 TTTACATTCTCAATTGTATCCGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAAA 2649
Query 134694 GTTTTAACGAAAATTTGCAT 134713
|| || || |||||||||||
Sbjct 2650 GTCTTGACAAAAATTTGCAT 2669
>seq3175
Length=8402
Score = 127 bits (140), Expect = 2e-24
Identities = 112/140 (80%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|||||||||||||| ||||||||||| || |||||||||||||| || || ||||| |
Sbjct 5252 CCTGCAAAAATCAACCGCTGCTGATCTGGGGGTATGCCTTCTTTGTCCTGTATTTTCGCT 5193
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | ||| || || ||||| || || || ||||| |||||||| ||||||
Sbjct 5192 TTTACATTCTCAATTGTATCCGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAAA 5133
Query 134694 GTTTTAACGAAAATTTGCAT 134713
|| || || |||||||||||
Sbjct 5132 GTCTTGACAAAAATTTGCAT 5113
>seq4574
Length=39733
Score = 122 bits (134), Expect = 9e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| ||||| || ||||| ||||| || || ||| | || || ||| ||
Sbjct 20834 ACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCC 20893
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| ||||| |||| ||||||||||| || || |||||||| || || ||
Sbjct 20894 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 20953
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| ||| |||||| || | || || || | ||||| || || || ||||| |||
Sbjct 20954 ATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTA 21013
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || ||||| || || ||||| ||||||
Sbjct 21014 CCCGTCAAAGTCTTTACAAAAATCTGCATT 21043
Score = 96.9 bits (106), Expect = 4e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
||||||||||| | |||||||| || ||||| || || || || ||||| |||||| |
Sbjct 22208 CCTGCAAAAATAAGGCGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGTATTTTTGCT 22267
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | |||||| || | ||||| || ||||| || ||||| || || |
Sbjct 22268 TTAACATTTTCAATTGTGTCTGAAGCCTCCACTTCAAGAGTGATTGTTTTTCCAGTCAGT 22327
Query 134694 GTTTTAACGAAAATTTGCATTTT 134716
||||| ||||| |||||||| ||
Sbjct 22328 GTTTTCACGAAGATTTGCATGTT 22350
Score = 82.4 bits (90), Expect = 8e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| || || ||||| |||||||| || ||||| || || || || || || ||||||
Sbjct 21884 CCCGCGAAGATCAATCGCTGCTGGTCTGGCGGAATTCCCTCCTTGTCCTGGATTTTTGCC 21943
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | || || || | |||||| || | || || ||||||||||| | |
Sbjct 21944 TTAACATTCTCGATGGTATCAGATGCTTCCACTTCCAATGTGATTGTTTTACCGGTAAGA 22003
Query 134694 GTTTTAACGAAAATTTGCAT 134713
|||||||| || ||||||||
Sbjct 22004 GTTTTAACAAAGATTTGCAT 22023
>seq4330
Length=27005
Score = 86.0 bits (94), Expect = 6e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
||||||||||| | || |||||||| || || || || || || || ||||||||
Sbjct 21274 CCTGCAAAAATAAGTCGTTGCTGATCAGGTGGAATACCCTCCTTATCCTGAATTTTAGTC 21215
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || || | || ||||||||||| || || || ||||| || || || |||||
Sbjct 21214 TTCACATTCTCAATAGTATCGGACGATTCTACCTCAAGGGTAATCGTCTTTCCAGTTAAC 21155
Query 134694 GTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725
||||| || || || ||||| ||| || |||
Sbjct 21154 GTTTTCACAAATATCTGCATCTTGGCTTGGTT 21123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505366149264600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |