Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4130 145 8e-30 seq4209 127 2e-24 seq3175 127 2e-24 seq4574 122 9e-23 seq4330 86.0 6e-12 >seq4130 Length=21019 Score = 145 bits (160), Expect = 8e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| ||||| || ||||| ||||| ||||| ||| | || || ||| || Sbjct 11847 ACTAGGTGCAGCGTCGACTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCC 11906 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| |||| ||||||||||| || || |||||||| || || || Sbjct 11907 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 11966 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 |||||| |||||| || | || || || | ||||| ||||| || ||||||||| Sbjct 11967 ATTTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTA 12026 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || ||||| || || |||||||||||| Sbjct 12027 CCCGTCAAAGTCTTTACAAAAATTTGCATT 12056 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 ||||||||||| | |||||||| || ||||| || || || || ||||| |||||| | Sbjct 13216 CCTGCAAAAATAAGGCGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGTATTTTTGCT 13275 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||| || | ||||| || ||||| || || || || |||| Sbjct 13276 TTAACATTTTCAATTGTGTCTGAAGCCTCCACCTCAAGAGTGATCGTCTTTCCAGTTAGC 13335 Query 134694 GTTTTAACGAAAATTTGCATTTT 134716 ||||| || || |||||||| || Sbjct 13336 GTTTTCACAAAGATTTGCATGTT 13358 >seq4209 Length=23298 Score = 127 bits (140), Expect = 2e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 |||||||||||||| ||||||||||| || |||||||||||||| || || ||||| | Sbjct 2530 CCTGCAAAAATCAACCGCTGCTGATCTGGGGGTATGCCTTCTTTGTCCTGTATTTTCGCT 2589 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | ||| || || ||||| || || || ||||| |||||||| |||||| Sbjct 2590 TTTACATTCTCAATTGTATCCGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAAA 2649 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || || ||||||||||| Sbjct 2650 GTCTTGACAAAAATTTGCAT 2669 >seq3175 Length=8402 Score = 127 bits (140), Expect = 2e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 |||||||||||||| ||||||||||| || |||||||||||||| || || ||||| | Sbjct 5252 CCTGCAAAAATCAACCGCTGCTGATCTGGGGGTATGCCTTCTTTGTCCTGTATTTTCGCT 5193 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | ||| || || ||||| || || || ||||| |||||||| |||||| Sbjct 5192 TTTACATTCTCAATTGTATCCGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAAA 5133 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || || ||||||||||| Sbjct 5132 GTCTTGACAAAAATTTGCAT 5113 >seq4574 Length=39733 Score = 122 bits (134), Expect = 9e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| ||||| || ||||| ||||| || || ||| | || || ||| || Sbjct 20834 ACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCC 20893 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| |||| ||||||||||| || || |||||||| || || || Sbjct 20894 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 20953 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| |||||| || | || || || | ||||| || || || ||||| ||| Sbjct 20954 ATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTA 21013 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || ||||| || || ||||| |||||| Sbjct 21014 CCCGTCAAAGTCTTTACAAAAATCTGCATT 21043 Score = 96.9 bits (106), Expect = 4e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 ||||||||||| | |||||||| || ||||| || || || || ||||| |||||| | Sbjct 22208 CCTGCAAAAATAAGGCGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGTATTTTTGCT 22267 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||| || | ||||| || ||||| || ||||| || || | Sbjct 22268 TTAACATTTTCAATTGTGTCTGAAGCCTCCACTTCAAGAGTGATTGTTTTTCCAGTCAGT 22327 Query 134694 GTTTTAACGAAAATTTGCATTTT 134716 ||||| ||||| |||||||| || Sbjct 22328 GTTTTCACGAAGATTTGCATGTT 22350 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || || || ||||| |||||||| || ||||| || || || || || || |||||| Sbjct 21884 CCCGCGAAGATCAATCGCTGCTGGTCTGGCGGAATTCCCTCCTTGTCCTGGATTTTTGCC 21943 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | || || || | |||||| || | || || ||||||||||| | | Sbjct 21944 TTAACATTCTCGATGGTATCAGATGCTTCCACTTCCAATGTGATTGTTTTACCGGTAAGA 22003 Query 134694 GTTTTAACGAAAATTTGCAT 134713 |||||||| || |||||||| Sbjct 22004 GTTTTAACAAAGATTTGCAT 22023 >seq4330 Length=27005 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 ||||||||||| | || |||||||| || || || || || || || |||||||| Sbjct 21274 CCTGCAAAAATAAGTCGTTGCTGATCAGGTGGAATACCCTCCTTATCCTGAATTTTAGTC 21215 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | || ||||||||||| || || || ||||| || || || ||||| Sbjct 21214 TTCACATTCTCAATAGTATCGGACGATTCTACCTCAAGGGTAATCGTCTTTCCAGTTAAC 21155 Query 134694 GTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725 ||||| || || || ||||| ||| || ||| Sbjct 21154 GTTTTCACAAATATCTGCATCTTGGCTTGGTT 21123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505366149264600