Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09]
5,105 sequences; 90,325,107 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq3785 95.1 1e-14
seq4803 87.8 1e-12
seq3064 84.2 2e-11
>seq3785
Length=14585
Score = 95.1 bits (104), Expect = 1e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 43894 TTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTT 43953
|| ||| | ||| || |||||||||||||| ||||||||||||| | ||| || || ||
Sbjct 6700 TTAGGTAAATCGTTTCTCGCAAGAAGTTCAAGTACCAGAAGCACGGTTTTTCTACGGTTT 6641
Query 43954 TCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013
||||||| || ||||| |||||||| ||||||||| |||| |||||||| ||
Sbjct 6640 TCAAATTATGATCGAAAACATTCATTCTGAAATGTACTCCAAAATGATTGATACGTATAT 6581
>seq4803
Length=64996
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 19614 AGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAA 19673
||| ||||| || || || || || || || | ||| | || |||||| | || || ||
Sbjct 32513 AGTTCATGATACGGTGGTTAACCAGCTGTTGGCCAAAATGGATGGTGTTGATCAGCTCAA 32454
Query 19674 TAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACG 19733
||| ||| | || ||||| ||||| || || || | || || || ||||||||
Sbjct 32453 TAACATTCTTGTAATTGGTATGACAAACAGGAAAGATATGATCGATGAAGCATTATTACG 32394
Query 19734 ACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGTGGA 19793
||| ||||| ||||| || | || |||||| ||||| |||||| || ||| | |
Sbjct 32393 ACCAGGTCGAATGGAAGTACAAATGGAAATTTCATTACCTGATGAAGCCGGTCGTTTACA 32334
Query 19794 AATTTTAAACATACATAC 19811
|||||| || || || ||
Sbjct 32333 AATTTTGAAAATTCACAC 32316
>seq3064
Length=7731
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 43903 TCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962
||| || |||||||||||||| | ||||||||||| | ||| || || |||||||||
Sbjct 6679 TCGTTTCTCGCAAGAAGTTCAAATGCCAGAAGCACGGTTTTTCTACGGTTTTCAAATTAT 6620
Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013
|| ||||| |||| ||| ||||||||| |||| |||||||| ||
Sbjct 6619 GATCGAAAACATTCGTTCTGAAATGTACTCCAAAATGATTGATACGTATAT 6569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397431271405525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |