Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3785 95.1 1e-14 seq4803 87.8 1e-12 seq3064 84.2 2e-11 >seq3785 Length=14585 Score = 95.1 bits (104), Expect = 1e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 43894 TTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTT 43953 || ||| | ||| || |||||||||||||| ||||||||||||| | ||| || || || Sbjct 6700 TTAGGTAAATCGTTTCTCGCAAGAAGTTCAAGTACCAGAAGCACGGTTTTTCTACGGTTT 6641 Query 43954 TCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013 ||||||| || ||||| |||||||| ||||||||| |||| |||||||| || Sbjct 6640 TCAAATTATGATCGAAAACATTCATTCTGAAATGTACTCCAAAATGATTGATACGTATAT 6581 >seq4803 Length=64996 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 19614 AGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAA 19673 ||| ||||| || || || || || || || | ||| | || |||||| | || || || Sbjct 32513 AGTTCATGATACGGTGGTTAACCAGCTGTTGGCCAAAATGGATGGTGTTGATCAGCTCAA 32454 Query 19674 TAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACG 19733 ||| ||| | || ||||| ||||| || || || | || || || |||||||| Sbjct 32453 TAACATTCTTGTAATTGGTATGACAAACAGGAAAGATATGATCGATGAAGCATTATTACG 32394 Query 19734 ACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGTGGA 19793 ||| ||||| ||||| || | || |||||| ||||| |||||| || ||| | | Sbjct 32393 ACCAGGTCGAATGGAAGTACAAATGGAAATTTCATTACCTGATGAAGCCGGTCGTTTACA 32334 Query 19794 AATTTTAAACATACATAC 19811 |||||| || || || || Sbjct 32333 AATTTTGAAAATTCACAC 32316 >seq3064 Length=7731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 43903 TCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962 ||| || |||||||||||||| | ||||||||||| | ||| || || ||||||||| Sbjct 6679 TCGTTTCTCGCAAGAAGTTCAAATGCCAGAAGCACGGTTTTTCTACGGTTTTCAAATTAT 6620 Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013 || ||||| |||| ||| ||||||||| |||| |||||||| || Sbjct 6619 GATCGAAAACATTCGTTCTGAAATGTACTCCAAAATGATTGATACGTATAT 6569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397431271405525