Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3379 87.8 2e-12 >seq3379 Length=9770 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 182697 TTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAACC 182756 ||||| ||||| |||||||||||||| | |||||| ||||| ||| |||||| | ||| Sbjct 1072 TTACCACGAAGAGGGAACACACCGTACTTATCACGTCCAACAACACCGAGACCTGAAACA 1131 Query 182757 GCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTGTGCC 182816 || | ||| || |||||||| || || | ||| || ||| ||| | | || | | | Sbjct 1132 GCCAACAATTTGGCTGAATCACCTTCTGTAAGAATAAGCGTAGACTGTGCCGAATTTTTC 1191 Query 182817 GTACCCGCCTTGTTCGCGTCATC 182839 ||||| || | ||| || || || Sbjct 1192 GTACCAGCATCGTTAGCATCTTC 1214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627991923708000