Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq4574 168 2e-36 seq4130 159 1e-33 seq5105 152 2e-31 seq4026 150 5e-31 seq4330 131 5e-25 seq4723 118 3e-21 seq4209 109 2e-18 seq3573 109 2e-18 seq3175 109 2e-18 seq5104 98.7 3e-15 seq5091 84.2 7e-11 >seq4574 Length=39733 Score = 168 bits (186), Expect = 2e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | ||||| || || || || ||||| || |||||||||||||| || Sbjct 20816 CCACCACGAAGGCGAAGAACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGAC 20875 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 ||||| || || || || || || || || |||||||| || || |||||||| || ||| Sbjct 20876 AATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGA 20935 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || ||||| || ||||| || || ||||| || || || || | |||||| | || ||| Sbjct 20936 ATGCCTTCCTTGTCCTGGATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACT 20995 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || ||||| | ||||| || || | || |||||||||||||||||| Sbjct 20996 TCTAGTGTTATGGTCTTACCCGTCAAAGTCTTTACAAAAATCTGCATT 21043 Score = 127 bits (140), Expect = 6e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || |||||||| || || || |||||||| |||||||| ||||||||||||||||| || Sbjct 21535 TTACCAGCAAAAATGAGGCGCTGCTGATCCGGAGGAATCCCTTCTTTATCCTGAATCTTG 21594 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| || || | |||||| | |||||||| | || | ||||| || || Sbjct 21595 GCCTTCACATTTTCGATTGTATCAGAAGCCTCAACTTCTAAGGTGATCGTCTTGCCCGTC 21654 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 | ||||||||||||||| ||||| Sbjct 21655 AATGTTTTTACAAAAATTTGCAT 21677 >seq4130 Length=21019 Score = 159 bits (176), Expect = 1e-33 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | ||||| || || || || ||||| || |||||||| ||||| || Sbjct 11829 CCACCACGAAGGCGAAGAACTAGGTGCAGCGTCGACTCCTTCTGAATATTGTAATCGGAC 11888 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 ||||| || || || || || || || || |||||||| || || |||||||| || ||| Sbjct 11889 AATGTACGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGA 11948 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || ||||| || ||||| ||||| ||||| || || || || | |||||| | || ||| Sbjct 11949 ATGCCTTCCTTGTCCTGGATTTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACT 12008 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || ||||| | || || || || | || ||||||||||| |||||| Sbjct 12009 TCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATTTGCATT 12056 Score = 123 bits (136), Expect = 8e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || |||||||| || || || |||||||| ||||| || ||||||||||||||||| || Sbjct 12548 TTACCAGCAAAAATAAGGCGCTGCTGATCCGGAGGGATCCCTTCTTTATCCTGAATCTTG 12607 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || |||||||| || || | ||||| | |||||||| | || | ||||| || || Sbjct 12608 GCCTTTACATTTTCGATTGTGTCAGAAGCCTCAACTTCTAAGGTGATCGTCTTGCCCGTC 12667 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 | ||||||||||||||| ||||| Sbjct 12668 AATGTTTTTACAAAAATTTGCAT 12690 >seq5105 Length=689533 Score = 152 bits (168), Expect = 2e-31 Identities = 246/351 (70%), Gaps = 2/351 (1%) Strand=Plus/Minus Query 349388 GATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAA 349447 || ||||| ||||| |||||| | | ||| ||| ||| ||||| ||| | ||| Sbjct 53114 GACGCTAAACGACTGATTGGTCGTAAGTTTGATGATGGATCAGTGCAATCGGATATGAAA 53055 Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATAT 349507 |||| || |||| || || | |||| |||||| | | |||||||||| Sbjct 53054 CATTGGCCATTTAAAGTAGTGAATGCTGGTGGTGGTAAACCTAAAGTGCAGGTTGAATAC 52995 Query 349508 AAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAAT 349566 || ||||| ||||| || || | || ||||| ||||| || |||||||| |||||||| Sbjct 52994 AAGGGTGAGACAAAGACCTTTACT-CCAGAAGAGATTTCGTCGATGGTTTTGGTTAAAAT 52936 Query 349567 GAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACC 349626 |||||| | |||||||| | | | ||| | | || | |||||||||||||| || || Sbjct 52935 GAAGGAGACGGCTGAAGCTTTTCTGGGTCATGCGGTCAAGGATGCTGTTATTACAGTCCC 52876 Query 349627 AGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTT 349686 || ||||||||||| | ||||| || || |||||| | || ||||| || | Sbjct 52875 CGCATATTTTAATGACTCACAGCGACAAGCCACTAAAGATTCCGGTGCAATTGCTGGTCT 52816 Query 349687 AAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 |||||| | | || || || ||||| || || || || ||||| ||||| Sbjct 52815 AAATGTCTTGCGTATTATCAACGAACCAACAGCAGCTGCTATTGCTTATGG 52765 Score = 122 bits (134), Expect = 3e-22 Identities = 169/235 (72%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATC--TATTACACGTGCT 350086 ||| || |||||||| || || || | ||||| || || | ||| || ||||| Sbjct 57100 TATCGAGATTGATTCACTCTTCGAAGGTACTGATTT--TTACACCAGTATCACTCGTGCC 57043 Query 350087 CGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146 || |||||||| | ||| ||||| || | |||| |||||||| || || |||| | Sbjct 57042 CGTTTTGAAGAGCTTTGTGCTGATCTGTTCCGTTCAACTATGGATCCAGTTGAGAAAGCA 56983 Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206 || ||||| || ||| ||| ||| || |||| | ||||||||||| |||||| Sbjct 56982 CTACGTGATGCTAAGATGGATAAAGCTCAAATGCATGACATTGTTTTAGTTGGCGGTTCT 56923 Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC 350261 || |||||||||||||| || | ||||| || || || ||| ||||||||||| Sbjct 56922 ACTCGTATTCCAAAAGTGCAGAAATTACTTTCCGATTTCTTTTCTGGCAAAGAAC 56868 Score = 100 bits (110), Expect = 9e-16 Identities = 91/114 (80%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 349282 AGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGA 349341 ||| || ||||||| |||||||| |||||||| || || || ||||| |||||||||| Sbjct 58729 AGGCAATCGAACAACCCCATCATATGTTGCATTCACTGATACCGAGCGCTTGATTGGTGA 58670 Query 349342 TTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTG--ATGCT 349393 | | |||||||| |||| |||| |||||| | ||||| ||||||| ||||| Sbjct 58669 TGCGGCAAAAAACCAAGTTGCTATGAATCCACATAATACTGTTTTTGGTATGCT 58616 Score = 93.3 bits (102), Expect = 1e-13 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 350029 TATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087 ||| ||||||||||| ||| | || || | ||||||| | ||| || ||||||| Sbjct 52152 TATCGAAATTGATTC-GTTGTTCGAGGGGATCGATTTCTACACCAATATCACTCGTGCTC 52094 Query 350088 GGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147 | ||||| ||||||||| |||||||| | |||| |||||||| || || |||| | Sbjct 52093 GCTTTGAGGAATTATGTGCTGATCTTTTCCGTTCAACTATGGATCCAGTTGAGAAAGCAC 52034 Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207 | ||||| || ||| ||| || | |||| | || |||| ||||| || | Sbjct 52033 TCCGTGATGCTAAGATGGACAAGGCCCAAGTCCATGACATTGTGCTAGTAGGTGGATCAA 51974 Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAA 350260 | ||||| || ||||| || || | | || || || ||| |||||||||| Sbjct 51973 CCCGTATCCCGAAAGTGCAGAAGCTCTTGTCAGATTTCTTTTCTGGCAAAGAA 51921 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 ||||||| |||||| | ||||||||||| |||||||| || | ||||| | || || | Sbjct 52645 TTCTTATCTTTGATCTTGGTGGTGGTACATTTGATGTGTCTATCCTAACTATCGAGGATG 52586 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875 | ||||| ||||| ||| | || ||||| ||||| |||||||| || Sbjct 52585 GTATTTTCGAAGTCAAATCTACAGCTGGAGATACTCATCTTGGAGG 52540 Score = 84.2 bits (92), Expect = 7e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 183692 ACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATT 183751 ||| || | ||| ||||| ||||| |||| ||| ||||| || || || || || ||| | Sbjct 52539 ACCTCCAAGATGAGTATCTCCAGCTGTAGATTTGACTTCGAAAATACCATCCTCGATAGT 52598 Query 183752 TAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || || || |||||||||||||||||||| | |||||| Sbjct 52599 TAGGATAGACACATCAAATGTACCACCACCAAGATCAAA 52637 >seq4026 Length=18768 Score = 150 bits (166), Expect = 5e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 ||| || || |||||| |||||||| | | ||||||||||||||||| ||||||||| | Sbjct 9825 ACCTGAGGAGATTTCAGCAATGGTTCTTGGCAAAATGAAGGAAATTGCGGAAGCATATCT 9766 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 ||| | ||||| |||| || |||| ||||| || || ||||||||||| || || Sbjct 9765 AGGAAAGGAAGTAAAACATGCAGTCGTTACGGTACCTGCTTACTTTAATGATGCACAACG 9706 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | || || |||||||| || | ||||| || | |||||| | | || || ||||| Sbjct 9705 TCAAGCTACCAAAGATGCAGGTACTATTGCCGGTCTCAATGTTGTTCGTATCATCAATGA 9646 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAA 349746 ||| || ||||| || ||||||||||| | ||||| Sbjct 9645 ACCTACAGCTGCCGCTATTGCATATGGATTGGATAA 9610 Score = 113 bits (124), Expect = 1e-19 Identities = 135/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 349232 TGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGA 349291 ||||||| || | |||||| || || ||||| ||||||||||| |||||||| || Sbjct 10214 TGTGTTGGAGTCTATAAAAATGGACGAGTGGAAATCATTGCAAATGAACAAGGTAATCGA 10155 Query 349292 ACAACGCCATCATACGTTGCATTTAC---CGAA---ACTGAGCGTATGATTGGTGATTCT 349345 | |||||||||||||||||||| || ||| ||||||| | ||||||||| | Sbjct 10154 ATCACGCCATCATACGTTGCATTCACTGGTGAAGGCGGTGAGCGTCTTATTGGTGATGCA 10095 Query 349346 GCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATT 349405 || |||||||| | | ||||| ||||||| || ||||||| ||| || || ||| Sbjct 10094 GCCAAAAATCAGTTAACAACGAATCCGGAAAATACTGTCTTTGATGTTAAACGTCTGATT 10035 Query 349406 GG 349407 || Sbjct 10034 GG 10033 Score = 89.7 bits (98), Expect = 2e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 |||||||| |||| ||| | |||||||||||||||||||| || | | ||| |||| Sbjct 9214 AATATTCTCGTTTTCGATCTTGGTGGTGGTACTTTTGATGTGTCGATGTTGACAATTGAT 9155 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 | || |||| ||||| || ||| ||||||||| ||| | ||||| ||||||||| Sbjct 9154 AATGGTGTTTTCGAAGTGTTGGCTACTAATGGTGATACTCATTTGGGTGGTGAAGATTTT 9095 Query 349886 GA 349887 || Sbjct 9094 GA 9093 Score = 84.2 bits (92), Expect = 7e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 ||||||||||||||||| ||||| ||||| ||| |||||| ||||| || | || Sbjct 9093 TCAAAATCTTCACCACCCAAATGAGTATCACCATTAGTAGCCAACACTTCGAAAACACCA 9152 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 | ||||| | || || || |||||||| ||||||||||| | ||| ||| Sbjct 9153 TTATCAATTGTCAACATCGACACATCAAAAGTACCACCACCAAGATCGAAA 9203 >seq4330 Length=27005 Score = 131 bits (144), Expect = 5e-25 Identities = 113/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || ||||| || || |||||||||||||| ||||| || || |||||||||||||||| Sbjct 21274 CCTGCAAAAATAAGTCGTTGCTGATCAGGTGGAATACCCTCCTTATCCTGAATTTTAGTC 21215 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| ||||| | ||| || | ||| || ||||| |||| |||||||| |||| Sbjct 21214 TTCACATTCTCAATAGTATCGGACGATTCTACCTCAAGGGTAATCGTCTTTCCAGTTAAC 21155 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||| ||||| |||||||| Sbjct 21154 GTTTTCACAAATATCTGCAT 21135 >seq4723 Length=53037 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 130740 CCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGAT 130799 ||||||| ||| ||||||||||| || || |||||||| ||||||| |||||| ||| | Sbjct 47882 CCTCCAATCATCACAAAATCAGCGCCGGCACCAAATGCCTTCGCAACATCCCCAGGATTT 47941 Query 130800 TTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCT 130859 | || | || || | ||||| || || || |||||||| ||||||||||| || Sbjct 47942 GTGCACCTTCCGTCGCTCACCACATGCCCGTTCAAACCATGTGCAGCATCAGCACATTCA 48001 Query 130860 GAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTTTTCTTGTAGTACAAACAGCA 130919 ||| ||| | ||| ||||| |||||||||||| || ||| |||||||| | | Sbjct 48002 AAAACAGCGCTCAATTGCGGATAGCCAACTCCAGTTTTCTTAAGTGTCGTACAAACTGAA 48061 Query 130920 CCTGGACC 130927 || |||| Sbjct 48062 CCATGACC 48069 >seq4209 Length=23298 Score = 109 bits (120), Expect = 2e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || ||||| || | || |||||||| || || || |||||||| ||||| ||||| ||| Sbjct 2530 CCTGCAAAAATCAACCGCTGCTGATCTGGGGGTATGCCTTCTTTGTCCTGTATTTTCGCT 2589 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 |||||||| ||||| | ||| || | ||| || ||||| |||| || || || |||| Sbjct 2590 TTTACATTCTCAATTGTATCCGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAAA 2649 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || |||||||| ||||| Sbjct 2650 GTCTTGACAAAAATTTGCAT 2669 >seq3573 Length=11695 Score = 109 bits (120), Expect = 2e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 130740 CCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATATCCCCGGGAGAT 130799 ||||||| ||| ||||||||| | || || ||||||| ||||||| || ||| | | | Sbjct 2737 CCTCCAATCATCACAAAATCAACGCCGGCACCAAATGTCTTCGCAACATTCCCAGAATTT 2796 Query 130800 TTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCATCAGCACACTCT 130859 | || || || || | ||||| || || || |||||||| ||||||||||| || Sbjct 2797 GTGCACCCTCCGTCGCTCACCACATGCCCGTTCAAACCATGTGCAGCATCAGCACATTCC 2856 Query 130860 GAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTTTTCTTGTAGTACAAACAGCA 130919 ||| ||| | ||| ||||| ||||||||| || || | ||| |||||||| | | Sbjct 2857 AAAACAGCGCTCAATTGCGGATAGCCAACTCCAATTTTCTTACGTGTCGTACAAACTGAA 2916 Query 130920 CCTGGACC 130927 || ||||| Sbjct 2917 CCAGGACC 2924 >seq3175 Length=8402 Score = 109 bits (120), Expect = 2e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || ||||| || | || |||||||| || || || |||||||| ||||| ||||| ||| Sbjct 5252 CCTGCAAAAATCAACCGCTGCTGATCTGGGGGTATGCCTTCTTTGTCCTGTATTTTCGCT 5193 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 |||||||| ||||| | ||| || | ||| || ||||| |||| || || || |||| Sbjct 5192 TTTACATTCTCAATTGTATCCGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAAA 5133 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || |||||||| ||||| Sbjct 5132 GTCTTGACAAAAATTTGCAT 5113 >seq5104 Length=557454 Score = 98.7 bits (108), Expect = 3e-15 Identities = 194/284 (68%), Gaps = 10/284 (4%) Strand=Plus/Plus Query 349600 AGTAACTGATGCTGTTATTACTGTAC---CAGCCTATTTTAATGATGCCCAGCGTTCTGC 349656 ||||| |||||||| || || || | |||| || || ||| || | || | || || Sbjct 18225 AGTAAAAGATGCTGTGATAACAGTGCTAGCAGCATACTTCAATAATTCTCAACATTAGGC 18284 Query 349657 AACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCAC 349716 |||||||||||| || | |||| || || ||||| || |||| ||||||||| | Sbjct 18285 AACAAAAGATGCAGGAAAAATTGTCGGATTGAATGTACTTTGAATAGTTAATGAACTAAT 18344 Query 349717 TGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTAT 349776 |||||| || |||| || | |||||||||| | || | | || | | || Sbjct 18345 TGCTGCGGCGCTTGCTTACAGTCTTGATAAAA----AGCACAGGTGCACAACAGTGGTA- 18399 Query 349777 TTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTT 349836 | ||| | |||||||||| |||||||| ||| |||| | | || |||||||| Sbjct 18400 -TATGACCTTGGTGGTGGTATATTTGATGT-TCAATACTCGAAATAAGTGATGGAATTTT 18457 Query 349837 TGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAG 349880 ||| || ||||| | ||||||||| | ||||| | |||| Sbjct 18458 TGATGTAAAAGCTATGAATGGTGATACCTACCTTGGAAGTGAAG 18501 >seq5091 Length=321914 Score = 84.2 bits (92), Expect = 7e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 54811 TGATGATATTTTTCATTGGCAAGCAACAATTATGGGACCAGAAGATACCCCGTATCAAGG 54870 ||||||| ||||||||||||| || || || ||||| || ||| | |||||||| || Sbjct 157524 TGATGATCTTTTTCATTGGCAGGCTACTATAATGGGCCCGCCAGAATCGCCGTATCATGG 157465 Query 54871 TGGTATATTTGAGTTAAGAATTGATTTTCCACAAGATTATCCATTTAAACCTCCAAATGT 54930 |||| | ||| | | |||| | ||||| ||||||||||| ||||| ||||| || Sbjct 157464 TGGTGTGTTTTTCCTGACAATTCACTTTCCGACGGATTATCCATTCAAACCACCAAAGGT 157405 Query 54931 A 54931 | Sbjct 157404 A 157404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515155290524315