Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq4130 96.9 3e-15 seq4574 89.7 4e-13 >seq4130 Length=21019 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||| ||| || || ||||| ||||||| | ||| || |||| || ||||| Sbjct 11853 TGCAGCGTCGACTCCTTCTGAATATTGTAATCGGACAATGTACGACCGTCCTCCAGCTGC 11912 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||||||||| || || |||||||| || | || | || || |||||| |||||| Sbjct 11913 TTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGGATTTTT 11972 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 ||||| | | | ||||| | |||||| || | || || |||| |||||| Sbjct 11973 GCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTC 12032 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| |||||||| Sbjct 12033 AAAGTCTTTACAAAAATTTGCAT 12055 >seq4574 Length=39733 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || ||||| ||| || || ||||||||||||| | ||| || |||| || Sbjct 20834 ACCAGGTGCAGCGTCGACTCCTTCTGAATATTATAATCGGACAATGTACGACCGTCCTCC 20893 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||||||||| || || |||||||| || | || | || || |||||| | Sbjct 20894 AGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGG 20953 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || ||||| | | | ||||| | |||||| || | || || | || Sbjct 20954 ATCTTTGCTTTGACGTTTTCGATAGTATCAGAAGCCTCCACTTCTAGTGTTATGGTCTTA 21013 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||||| || || ||||| || ||||| Sbjct 21014 CCCGTCAAAGTCTTTACAAAAATCTGCAT 21042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429518874880865