Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq1131 2186 0.0 seq1110 1223 0.0 seq1136 1045 0.0 seq1097 580 3e-161 >seq1131 Length=1733 Score = 2186 bits (2424), Expect = 0.0 Identities = 1228/1237 (99%), Gaps = 1/1237 (0%) Strand=Plus/Plus Query 1 GGGCGGCGACCTCGCGGGTTTTCGCTATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 498 GGGCGGCGACCTCGCGGGTTTTCGCTATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCG 557 Query 61 TTCTTCTTCGTCATAACTTAATGTTTTTATTTAAAATACCCTCTGAAAAGAAAGGAAACG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 558 TTCTTCTTCGTCATAACTTAATGTTTTTATTTAAAATACCCTCTGAAAAGAAAGGAAACG 617 Query 121 ACAGGTGCTGAAAGCGAGGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGT 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 618 ACAGGTGCTGAAAGCGAG-CTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGT 676 Query 181 GGAATGAACAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCG 240 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 677 GGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCG 736 Query 241 TACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 737 TACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAA 796 Query 301 TGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 797 TGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAAT 856 Query 361 TGAGAACGAAAAGCTGCGCCGGGAGGTTGAAGAACTGCGGCAGGCCAGCGAGGCAGATCT 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 857 TGAGAACGAAAAGCTGCGCCGGGAGGTTGAAGAACTGCTGCAGGCCAGCGAGACAGATCT 916 Query 421 CCAGCCAGGAACTATTGAGTACGAACGCCATCGACTTACGCGTGCGCAGGCCGACGCACA 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 917 CCAGCCAGGGACTATTGAGTACGAACGCCATCGACTTACGCGTGCGCAGGCCGACGCACA 976 Query 481 GGAACTGAAGAATGCCAGAGACTCCGCTGAAGTGGTGGAAACCGCATTCTGTACTTTCGT 540 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 977 GGAGCTGAAAAATGCCAGAGACTCCGCTGAAGTGGTGGAAACCGCATTCTGTACTTTCGT 1036 Query 541 GCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGACGGGCTCCCCCTGTCGGTGCA 600 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1037 GCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGACGGGATCCCCCTGTCGGTGCA 1096 Query 601 GCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACGGGATATCATCAA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1097 GCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACGGGATATCATCAA 1156 Query 661 AGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCTGAGTGAATATAT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1157 AGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCTGAGTGAATATAT 1216 Query 721 CGAACAGTCAGGTTAACAGGCTGCGGCATTTTGTCCGCGCCGGGCTTCGCTCACTGTTCA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1217 CGAACAGTCAGGTTAACAGGCTGCGGCATTTTGTCCGCGCCGGGCTTCGCTCACTGTTCA 1276 Query 781 GGCCGGAGCCACAGACCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAAT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1277 GGCCGGAGCCACAGACCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAAT 1336 Query 841 CCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGA 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1337 CCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGA 1396 Query 901 TGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCA 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1397 TGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCA 1456 Query 961 AAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCAGCGCAACACCCTTATCT 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1457 AAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCAGCGCAACACCCTTATCT 1516 Query 1021 GGTTGCCGACGGATGGTGATGCCGAGAACTTTATGAAAACCCACGTTGAGCCGACTATTC 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1517 GGTTGCCGACGGATGGTGATGCCGAGAACTTTATGAAAACCCACGTTGAGCCGACTATTC 1576 Query 1081 GTGATATTCCGTCGCTGCTGGCGCTGGCCCCGTGGTATGGCAAAAAGCACCGGGATAACA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1577 GTGATATTCCGTCGCTGCTGGCGCTGGCCCCGTGGTATGGCAAAAAGCACCGGGATAACA 1636 Query 1141 CGCTCACCATGAAGCGTTTCACTAATGGGCGTGGCTTCTGGTGCCTGGGCGGTAAAGCGG 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1637 CGCTCACCATGAAGCGTTTCACTAATGGGCGTGGCTTCTGGTGCCTGGGCGGTAAAGCGG 1696 Query 1201 CAAAAAACTACCGTGAAAAGTCGGTGGATGTGGCGGG 1237 ||||||||||||||||||||||||||||||||||||| Sbjct 1697 CAAAAAACTACCGTGAAAAGTCGGTGGATGTGGCGGG 1733 Score = 897 bits (994), Expect = 0.0 Identities = 497/497 (100%), Gaps = 0/497 (0%) Strand=Plus/Plus Query 48006 CACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTG 48065 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATTAAGTG 60 Query 48066 AATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATGTTCATTCTTCATCACTTT 48125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATGTTCATTCTTCATCACTTT 120 Query 48126 TAATTGATGTATATGCTCTCTTTTCTGACGTTAGTCTCCGACGGCAGGCTTCAATGACCC 48185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TAATTGATGTATATGCTCTCTTTTCTGACGTTAGTCTCCGACGGCAGGCTTCAATGACCC 180 Query 48186 AGGCTGAGAAATTCCCGGACCCTTTTTGCTCAAGAGCGATGTTAATTTGTTCAATCATTT 48245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGGCTGAGAAATTCCCGGACCCTTTTTGCTCAAGAGCGATGTTAATTTGTTCAATCATTT 240 Query 48246 GGTTAGGAAAGCGGATGTTGCGGGTTGTTGTTCTGCGGGTTCTGTTCTTCGTTGACATGA 48305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GGTTAGGAAAGCGGATGTTGCGGGTTGTTGTTCTGCGGGTTCTGTTCTTCGTTGACATGA 300 Query 48306 GGTTGCCCCGTATTCAGTGTCGCTGATTTGTATTGTCTGAAGTTGTTTTTACGTTAAGTT 48365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GGTTGCCCCGTATTCAGTGTCGCTGATTTGTATTGTCTGAAGTTGTTTTTACGTTAAGTT 360 Query 48366 GATGCAGATCAATTAATACGATACCTGCGTCATAATTGATTATTTGACGTGGTTTGATGG 48425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GATGCAGATCAATTAATACGATACCTGCGTCATAATTGATTATTTGACGTGGTTTGATGG 420 Query 48426 CCTCCACGCACGTTGTGATATGTAGATGATAATCATTATCACTTTACGGGTCCTTTCCGG 48485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CCTCCACGCACGTTGTGATATGTAGATGATAATCATTATCACTTTACGGGTCCTTTCCGG 480 Query 48486 TGATCCGACAGGTTACG 48502 ||||||||||||||||| Sbjct 481 TGATCCGACAGGTTACG 497 >seq1110 Length=2318 Score = 1223 bits (1356), Expect = 0.0 Identities = 703/727 (97%), Gaps = 0/727 (0%) Strand=Plus/Plus Query 45949 GTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCA 46008 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1592 GTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCA 1651 Query 46009 TCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAG 46068 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1652 TCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAG 1711 Query 46069 CCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGC 46128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1712 CCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGAGATGC 1771 Query 46129 AGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATG 46188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1772 AGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATG 1831 Query 46189 CTAAAGCTGAAAATGATGCTCTGCGTGATNNNNNNNNNNNNNNNNNNNNNNGGTTGCACA 46248 | ||||||||||||||||||||||||||| ||||||||| Sbjct 1832 CGAAAGCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACA 1891 Query 46249 TCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAG 46308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1892 TCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAG 1951 Query 46309 CCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGGCTGA 46368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1952 CCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGGCTGA 2011 Query 46369 TCACTATGCAAAAACAACTGGAAGGAACCCAGAAGTATATTAATGAGCAGTGCAGATAGA 46428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2012 TCACTATGCAAAAACAACTGGAAGGAACCCAGAAGTATATTAATGAGCAGTGCAGATAGA 2071 Query 46429 GTTGCCCATATCGATGGGCAACTCATGCAATTATTGTGAGCAATACACACGCGCTTCCAG 46488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2072 GTTGCCCATATCGATGGGCAACTCATGCAATTATTGTGAGCAATACACACGCGCTTCCAG 2131 Query 46489 CGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGT 46548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2132 CGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGT 2191 Query 46549 TTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTGGCTGCATCGACAGTTTTCTT 46608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2192 TTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTGGCTGCATCGACAGTTTTCTT 2251 Query 46609 CTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGC 46668 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2252 CTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGC 2311 Query 46669 CGGTTTG 46675 ||||||| Sbjct 2312 CGGTTTG 2318 >seq1136 Length=1633 Score = 1045 bits (1158), Expect = 0.0 Identities = 623/652 (96%), Gaps = 0/652 (0%) Strand=Plus/Plus Query 21887 GGACACACCATCACCGTTAACGCTGCGGGTAACGCGGAAAACACCGTCAAAAACATTGCA 21946 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 184 GGACACACCATCACCGTTAACGCTGCTGGTAACGCGGAAAACACCGTCAAAAACATCGCA 243 Query 21947 TTTAACTATATTGTGAGGCTTGCATAATGGCATTCAGAATGAGTGAACAACCACGGACCA 22006 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 244 TTTAACTATATTGTGAGGCTTGCATAATGGCATTCAGAATGAGTGAACAACCACGGACCA 303 Query 22007 TAAAAATTTATAATCTGCTGGCCGGAACTAATGAATTTATTGGTGAAGGTGACGCATATA 22066 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 304 TAAAAATTTATAATCTGCTGGCCGGAACTAATGAATTTATTGGTGAAGGTGATGCATATA 363 Query 22067 TTCCGCCTCATACCGGTCTGCCTGCAAACAGTACCGATATTGCACCGCCAGATATTCCGG 22126 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 364 TTCCGCCTCATACAGGTCTGCCAGCAAACAGTACCGATATTGCACCGCCAGATATTCCGG 423 Query 22127 CTGGCTTTGTGGCTGTTTTCAACAGTGATGAGGCATCGTGGCATCTCGTTGAAGACCATC 22186 ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct 424 CTGGCTTCGTGGCTGTTTTCAACAGTGATGAGTCATCGTGGCATCTCGTTGAAGATCATC 483 Query 22187 GGGGTAAAACCGTCTATGACGTGGCTTCCGGCGACGCGTTATTTATTTCTGAACTCGGTC 22246 |||||||||| || ||||||||||| || || |||||||||||||||||||||||||||| Sbjct 484 GGGGTAAAACGGTTTATGACGTGGCGTCAGGGGACGCGTTATTTATTTCTGAACTCGGTC 543 Query 22247 CGTTACCGGAAAATTTTACCTGGTTATCGCCGGGAGGGGAATATCAGAAGTGGAACGGCA 22306 |||||||||||||| |||||||||||||||||| |||||| | ||||||||||||||||| Sbjct 544 CGTTACCGGAAAATGTTACCTGGTTATCGCCGGAAGGGGAGTTTCAGAAGTGGAACGGCA 603 Query 22307 CAGCCTGGGTGAAGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAA 22366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 604 CAGCCTGGGTGAAGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAA 663 Query 22367 CaaaaaaaaGCCTGATGCAGGTAGCCAGTGAGCATATTGCGCCGCTTCAGGATGCTGCAG 22426 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 664 CAAAAAACAACCTGATGCAGGTAGCCAGTGAGCATATTGCGCCGCTTCAGGATGCTGCAG 723 Query 22427 ATCTGGAAATTGCAACGAAGGAAGAAACCTCGTTGCTGGAAGCCTGGAAGAAGTATCGGG 22486 ||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||| Sbjct 724 ATCTGGAAATTGCAACGGAGGAAGAAATCTCGTTGCTGGAAGCATGGAAAAAGTATCGGG 783 Query 22487 TGTTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTGC 22538 | |||||||||||||||||||| |||||||||| |||||||| ||||| || Sbjct 784 TATTGCTGAACCGTGTTGATACGTCAACTGCACAGGATATTGAATGGCCAGC 835 >seq1097 Length=3195 Score = 580 bits (642), Expect = 3e-161 Identities = 368/399 (92%), Gaps = 0/399 (0%) Strand=Plus/Plus Query 39972 TACGAGTATTGCCGGAAGCGAGGCCTGTATCCGGATGCGGAGTCTTATCCGTGGAAATCA 40031 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 618 TACGAGTATTGCCGGAAGCGTGGCCTGTATCCGGATGCAGAGTCTTATCCGTGGAAATCG 677 Query 40032 AACGCGCACTACTGGCTGGTTACCAACCTGTATCAGAACATGCGGGCCAATGCGCTTACT 40091 |||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| || Sbjct 678 AACGCGCATTACTGGTTGGTTACCAACTTGTACCAGAACATGCGGGCCAATGCGCTGGCT 737 Query 40092 GATGCGGAATTACGCCGTAAGGCCGCAGATGAGCTTGTCCATATGACTGCGAGAATTAAC 40151 || ||||||||||| || ||||| || ||||| || | |||||| ||| |||||||| Sbjct 738 GACGCGGAATTACGGCGCAAGGCTGCCGATGAACTGACCTGTATGACAGCGCGAATTAAC 797 Query 40152 CGTGGTGAGGCGATCCCTGAACCAGTAAAACAACTTCCTGTCATGGGCGGTAGACCTCTA 40211 ||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 798 CGTGGTGAGACGATACCTGAACCAGTAAAACAACTTCCTGTTATGGGCGGTAGACCTCTA 857 Query 40212 AATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATCAAAGCTAAGTTCGGACTGAAAGGA 40271 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 858 AATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGA 917 Query 40272 GCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAATAGCTTCT 40331 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 918 GCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCT 977 Query 40332 GTGCGCCGGACGTTGCCGCGCTAACAGGCGCAACAGTAA 40370 |||| | ||||||||||||| ||||||||||||| |||| Sbjct 978 GTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAA 1016 Score = 526 bits (582), Expect = 7e-145 Identities = 300/306 (98%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 31322 TACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATT 31381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 314 TACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATT 373 Query 31382 TCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACGATCTCGTCAAAACTCGCC 31441 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 374 TCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCC 433 Query 31442 ATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGG 31501 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 434 ATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGG 493 Query 31502 TCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCACCTGG 31561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 494 TCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCACCTGG 553 Query 31562 GCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGG 31621 ||||||||||| || ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 554 GCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGG 613 Query 31622 GAGGTA 31627 |||||| Sbjct 614 GAGGTA 619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155076792584064