Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq2917 95.1 3e-15 >seq2917 Length=1043 Score = 95.1 bits (104), Expect = 3e-15 Identities = 73/86 (85%), Gaps = 8/86 (9%) Strand=Plus/Minus Query 17240 ACCGCCATTAGCTCATCAGGAAGAGCAGACGACACGATAACAGGGTTGT----TGGTGCG 17295 |||||||||||||||||||||||||||||||||| | |||| |||| |||| || Sbjct 897 ACCGCCATTAGCTCATCAGGAAGAGCAGACGACA----ACCAGGATTGTTGTATGGTACG 842 Query 17296 GGGTTCGAGTCCTGGATGGCGGTCCA 17321 ||||||||| ||| |||||||||||| Sbjct 841 GGGTTCGAGGCCTCGATGGCGGTCCA 816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136111371866712