Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_004777.1 Length=37555 Score E Sequences producing significant alignments: (Bits) Value seq1067 210 5e-50 >seq1067 Length=4963 Score = 210 bits (232), Expect = 5e-50 Identities = 125/130 (96%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 21723 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 21782 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4927 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 4868 Query 21783 GCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTTAAAGGAGGAGGA 21842 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 4867 GCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA---AGGAGGA 4811 Query 21843 ACTATATGCG 21852 ||||||| || Sbjct 4810 ACTATATCCG 4801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120048201291192