Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1991 86.0 1e-11 >seq1991 Length=231824 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 298321 GGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCG 298380 ||| || ||||| |||||||||| ||||||||| || ||||| || ||||| | || || Sbjct 165151 GGAGGCTTCGCGAACATTCAATAATTTTCCACGGAGTGGGAATACGCCATAGTTGTCACG 165210 Query 298381 ACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAAT 298440 ||||||||| ||| || |||| || | | | || ||||| || || || || || Sbjct 165211 ACCGACCACACCCAGACCAGCGACAGCCAAAGACTTGGCTGAATCTCCTTCAGTAAGTAT 165270 Query 298441 GAGAGTGCAC 298450 ||||||||| Sbjct 165271 AAGAGTGCAC 165280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102818559933800