Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_011045.1 Length=38841 Score E Sequences producing significant alignments: (Bits) Value seq1067 212 2e-50 >seq1067 Length=4963 Score = 212 bits (234), Expect = 2e-50 Identities = 124/127 (98%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 22573 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 22632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4927 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 4868 Query 22633 GCAT-ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTTAAAGGAGGAACT 22691 |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 4867 GCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACT 4808 Query 22692 ATATGCG 22698 |||| || Sbjct 4807 ATATCCG 4801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124163188813128