Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_011551.1 Length=39867 Score E Sequences producing significant alignments: (Bits) Value seq1097 163 7e-36 >seq1097 Length=3195 Score = 163 bits (180), Expect = 7e-36 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 26694 AGCCTTCTCTTCAATCCATCTCAAGCAGGCTTCGTCAAATGTGACATTAGGAAAATCATC 26753 ||| || || |||| |||||| | |||||| || ||||| ||||||| ||| ||||| | Sbjct 8 AGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCC 67 Query 26754 TAACTTTGCTATTCTCCATAATTCAGCTTTTCGTTTGTCGTGTAACTCCTGAGCTTGTTT 26813 || |||| ||| || ||| | ||| |||||||| |||||||| |||||||||||||| Sbjct 68 TAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCG 127 Query 26814 TTTGTCCTCTGTGCCAAGTGATTCCTTAATTCTTTTTCCGCACGG 26858 |||||||| ||||||||| ||||||||||||| ||| |||| ||| Sbjct 128 TTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTCCCGCCCGG 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127446219293304