Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1550 214 7e-50 seq1355 167 9e-36 seq1546 150 7e-31 seq1873 129 2e-24 seq1867 118 4e-21 seq1332 118 4e-21 seq2001 89.7 2e-12 >seq1550 Length=270027 Score = 214 bits (236), Expect = 7e-50 Identities = 467/690 (68%), Gaps = 17/690 (2%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 || |||||||| ||||| ||||| || || |||||||||||||| | |||||| || Sbjct 31117 GCGATTGGAATCGATCTGGGAACTACGTTCTCATGTGTAGGTGTGTTCCAAAACAACAAG 31176 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || |||||||| ||||||||||||||| || || |||||| | || ||||| Sbjct 31177 GTGGAAATTATTGCAAATGACCAAGGAAACCGCACAACTCCTAGTTATGTGGCCTTTACT 31236 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAAA 451092 || | ||| | | | || | || ||||| | | | ||| | ||| | || Sbjct 31237 GAGACGGAACGTTTGATTGGTGATGCGGCTAAGAACCA-GGTTGCTATGAATCCATCTAA 31295 Query 451093 CACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAA 451152 ||| || | ||||| || || |||| || |||| ||||||||| ||||| ||| | Sbjct 31296 CACGGTCTTCGATGCCAAGCGCCTAATCGGTCGTAGGTATGATGACCCCACTGTCCAAGA 31355 Query 451153 AGA--GAAAAAATT--CTTTTCTTA-TGATGTAGTAAATCAAAAAGGAAAGCCCTATATT 451207 || | |||| | | ||| | |||| | || |||| || ||||| | ||| Sbjct 31356 GGATCGTAAAATGTGGCCATTCACACTGAT----TGAA-GAAAATGGCAAGCCAAAAATT 31410 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 || || | || |||||| ||| ||||| || | |||| || || || || ||||| Sbjct 31411 CAGGTCGAATACAAAGGTCAAAGGAAAACGTTCTTTGCTGAGGAGATATCCTCGATGGTG 31470 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | || || ||||| |||| ||||| ||| | || | || | ||| ||||| Sbjct 31471 TTGACAAAGATGAAGGAAATTGCAGAGGCCTATTTGGGAAAGACCGTCAGTGAGGCAGTT 31530 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 || ||||| || ||||| ||||||||| ||| ||||||| || || |||||||| Sbjct 31531 ATCACTGTGCCGGCTTACTTCAATGATAGTCAAAGGCAAGCCACGAAGGATGCAGGGACG 31590 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 ||||| ||| |||| ||||| || ||||| |||||||| |||||||| || | || || Sbjct 31591 ATTGCCGGTCTAAACGTTCTACGGATTATCAATGAACCAACAGCAGCAGCCATTGCGTAC 31650 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAA-GaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506 || || | || | ||| | || |||| ||| || | | |||||| | ||||| Sbjct 31651 GGCCTGG----ATAAGAAGGCCGATAACGAAAGAAACGTTCTCATCTTTGATCTCGGTGG 31706 Query 451507 AGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAAC 451566 ||||| |||| || || || | || ||||| || |||||||||| || | || Sbjct 31707 TGGAACCTTTGATGTCTCGGTGCTGGCCATCGAAGAGGGCATATTTGAAGTGAAATCCAC 31766 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGA 451596 |||||||| ||| | || || || || Sbjct 31767 TGCCGGTGATACACATTTGGGCGGGGAGGA 31796 Score = 118 bits (130), Expect = 4e-21 Identities = 382/578 (66%), Gaps = 20/578 (3%) Strand=Plus/Plus Query 451890 AAATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGT 451949 ||||| |||| ||||| || || || ||||| || ||||| || |||||||| || || Sbjct 32090 AAATTCATGAGATTGTTCTCGTGGGTGGTTCAACCCGAATCCCGAAAATTCA-GAAAT-- 32146 Query 451950 TGTCTTCTTA---TTTTGGA-GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCT 452005 || |||| |||| | |||||| | | || | |||||||||||||| Sbjct 32147 TG-CTTCAAGAGTTTTTCAACGGAAAAGAGTTGAACAAATCTATCAATCCTGATGAAGCA 32205 Query 452006 GTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGG-TTCAGATGATGAAAAATT 452064 || || ||||| ||||| ||||| || || ||||| || || || || || | | Sbjct 32206 GTAGCCTATGGAGCTGCCGTTCAGGCCGCAATTCTTACTGGAGTCCAAT-CGGATACCGT 32264 Query 452065 AGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGG 452124 | ||| | |||||| | ||||| |||||| | || || || | ||||| || || || Sbjct 32265 ACAAGACTTGCTGTTACTTGATGTGACACCTTTGTCCCTAGGTTTGGAAACTGCGGGAGG 32324 Query 452125 AATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATT 452184 ||||||| || || |||||| || |||| || ||| | | ||||| || Sbjct 32325 TGTGATGACGTCGTTGATCAAACGAAACACGACTATCCCAACAAAACAAACGCAAACGTT 32384 Query 452185 TAGTAC---AGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACG 452241 || || ||| || || || || ||||| || || || | ||||| ||||| Sbjct 32385 TACCACCTACGCA---GACAATCAGCCCGGTGTTTTGATACAGGTTTACGAAGGCGAACG 32441 Query 452242 TGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTAT 452301 ||| ||||| | ||||| || | ||| ||||| | | || ||||| || Sbjct 32442 TGCCATGACCAGGGATAACAACCTCTTGGGAAAATTTGATTTGTCTGGGATTCCACCCGC 32501 Query 452302 GCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAA 452361 || | || | || ||||||||| | || | ||| |||| || ||||| || || || Sbjct 32502 TCCTCGAGGTATACCGCAAATTGAAGTCACGTTTGACATTGACGCGAATGGAATCCTGAA 32561 Query 452362 TGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATA 452420 |||| ||||| || || | || ||| ||||| || || ||||| || || |||| Sbjct 32562 TGTGTCCGCAGTGGACAAGAGTACAGGTAAA-CAGAACAAGATAACAATCACCAACGATA 32620 Query 452421 AAAACCGTTTATCTAAAGA-AGATATTGAAAAAATGGT 452457 | ||||| || ||||| || ||||| |||||| Sbjct 32621 AGGGTCGTTTGTC-AAAGACGGAGATTGACCGAATGGT 32657 >seq1355 Length=477810 Score = 167 bits (184), Expect = 9e-36 Identities = 260/369 (70%), Gaps = 6/369 (2%) Strand=Plus/Plus Query 451235 ACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAA 451294 || |||||||| |||||||| || | ||||| || ||| ||||| |||| || ||| Sbjct 108530 ACGTTTGCTCCGGAAGAAATATCGGCAATGGTCCTCGGTAAGATGAAGGAAAGTGCTGAA 108589 Query 451295 CAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGAT 451354 ||| | || ||||| || | || || |||||||||||||| || || || ||| Sbjct 108590 GCTTATTTGGGCAAACCAGTCACGCACGCCGTCATTACTGTTCCCGCCTACTTTAACGAT 108649 Query 451355 GCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATT 451414 ||||| || ||||| || || ||||| || || |||||| |||| || | ||||| Sbjct 108650 GCACAGCGTCAAGCCACAAAGGATGCTGGTGTCATCGCTGGTCTAAAAGTGTTGCGAATA 108709 Query 451415 ATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAA 451474 || ||||||||||| || ||||| | ||||| || | ||| || ||| || | Sbjct 108710 ATCAATGAACCTACGGCTGCTGCCATCGCATACGG-TTTGGATAA--AAAGGA---GGGT 108763 Query 451475 GaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCA 451534 || || || ||| | || | ||||| |||||||| ||| |||| ||| | | | Sbjct 108764 GAGAAGAACATTCTGGTGTACGATTTGGGTGGAGGTACTTTTGATGTTTCCTTGTTGACC 108823 Query 451535 ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594 ||||| | || || || || ||| |||||||| |||||| || ||| | |||||||| Sbjct 108824 ATTGAGAACGGCGTGTTCGAGGTAGTGGCAACCAGTGGTGACACGCATTTGGGAGGTGAG 108883 Query 451595 GATATTGAT 451603 || ||||| Sbjct 108884 GACTTTGAT 108892 >seq1546 Length=268189 Score = 150 bits (166), Expect = 7e-31 Identities = 453/695 (65%), Gaps = 12/695 (2%) Strand=Plus/Plus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 ||||||| ||||| || || || | |||||| || || || | |||| ||||||| || | Sbjct 177983 TTGGAATCGATCTGGGTACGACATATTCATGCGTTGGAGTGTTCCAACATGGAAAAGTGG 178042 Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTT----TTACG 451033 |||| || || || || |||||| || || || || || | || ||| |||| Sbjct 178043 AAATCATTGCCAACGATCAAGGAAATCGCACAACACC--CA--GCTATGTTGCATTTACA 178098 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAAA--TCAATGGTAAATTCAAATGCCAAAA 451091 ||| | ||| |||| | || | || |||||| |||| ||| ||| | || | Sbjct 178099 GATACCGAACGACTGATTGGTGATGCCGCTAAAAATCAAGTCGCAATG--AATCCGAACA 178156 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 |||| || | |||| || | || || || || | |||||| | || Sbjct 178157 ACACCGTGTTCGATGTCAAGAGATTGATCGGTCGGCGATTCGATGATCCGTCGGTGACGT 178216 Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211 || ||| || |||| ||| ||||| | || || ||||| | | | | Sbjct 178217 CTGACCGTAAACACTGGTCTTTTGAAGTAGTCCAAGAAGGTGGCAAGCCAAAGGTCCGTG 178276 Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271 | | || |||||||| | || || || | || || || || || || ||||| | | Sbjct 178277 TGGAGTACAAAGGTGAGATCAAGACATTCTCGCCAGAGGAGATATCGTCGATGGTGTTGA 178336 Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331 |||| ||||| || ||||| || |||| |||| | ||| | ||||| || |||| Sbjct 178337 CTAAGATGAAGGAGACAGCCGAGGCATATCTTGGCACGAAAGTGAAGGATGCTGTGATTA 178396 Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTG 451391 ||||||| |||||||| || || ||||| ||||| || || ||||| || |||| Sbjct 178397 CTGTTCCGGCTTATTTTAACGACAGTCAACGTCAAGCGACGAAGGATGCGGGTGCCATTG 178456 Query 451392 CTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGAC 451451 ||| | | |||||| | || || || || ||||| ||||| ||||| | ||||| || | Sbjct 178457 CTGCTCTGAATGTTTTGCGTATCATCAACGAACCGACAGCTGCTGCGATTGCATACGGGC 178516 Query 451452 TAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAA 451511 ||| || | | || || | | | | |||||||| ||||||| || | Sbjct 178517 TAGACAAGAAGGTGGGTAAAGGTGAGCGACACGTGCTGATATTTGATCTTGGTGGTGGTA 178576 Query 451512 CTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATG 451571 | |||| ||| | || | || || ||||| ||||| ||||| ||| | || | Sbjct 178577 CATTTGATGTTTCCATCCTCACGATCGACGATGGTGTATTCGAAGTGAAGTCGACGGCCG 178636 Query 451572 GTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 |||| || ||| | || ||||| ||| | |||||| Sbjct 178637 GTGACACGCATTTGGGTGGTGAGGATTTCGATAAT 178671 >seq1873 Length=396352 Score = 129 bits (142), Expect = 2e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||||| || || || |||||||| ||||| |||||| |||| Sbjct 292489 ATGCAGATCTTCGTCAAGACACTCACGGGAAAGACTATTACGCTTGAGGTTGAAGCATCG 292548 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| ||| | | ||| || |||||||| |||||||| || ||||| |||||| Sbjct 292549 GATACCATCGAAAATGTCAAAGCCAAGATTCAAGACAAGGAAGGGATCCCTCCAGATCAA 292608 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || |||||| | || || ||||| || || || | ||| | | ||||| || Sbjct 292609 CAACGATTGATTTTCGCGGGAAAGCAACTGGAGGACGGCCGTACTCTTTCTGATTACAAC 292668 Query 391230 ATTGATAAGGA 391240 ||| | || || Sbjct 292669 ATTCAGAAAGA 292679 >seq1867 Length=410790 Score = 118 bits (130), Expect = 4e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || ||||| ||||| || || || || ||||| |||||| || Sbjct 315464 AATGCAAATATTCGTGAAGACACTTACTGGGAAGACCATCACCCTTGAAGTTGAAGCAAG 315405 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| |||||| | | || || |||||||| |||||||| || || ||||| || Sbjct 315404 CGATACCATTGAGAATGTAAAGGCGAAGATTCAAGACAAGGAAGGCATCCCACCTGACCA 315345 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| ||||| | || |||||||||||||| || ||||| || | ||||| || Sbjct 315344 GCAGCGTTTGATTTTTGCCGGCAAACAACTTGAAGACGGTCGAACTCTGTCCGATTACAA 315285 Query 391229 TAT 391231 || Sbjct 315284 CAT 315282 Score = 107 bits (118), Expect = 8e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || ||||| ||||| || || || ||||| |||||| || Sbjct 315235 ATGCAGATATTTGTGAAGACCCTGACCGGTAAGACGATCACCCTTGAAGTTGAAGCAAGC 315176 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | || || |||||||| || ||||| || || ||||| || Sbjct 315175 GATACCATTGAGAATGTGAAGGCGAAGATTCAAGACAAAGAAGGCATCCCACCTGACCAG 315116 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| ||||| | || |||||||||||||| || ||||| || | ||||| || Sbjct 315115 CAGCGTTTGATTTTTGCCGGCAAACAACTTGAAGACGGTCGAACTCTGTCCGATTACAAC 315056 Query 391230 AT 391231 || Sbjct 315055 AT 315054 Score = 95.1 bits (104), Expect = 5e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||||||| || ||||| || || || || || | | Sbjct 291428 ATGCAGATTTTTGTGAAGACGCTGACTGGCAAGACTATCACCCTCGAGGTCGAGGCCAGT 291369 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | ||| || ||||||||||||||||| || || ||||| || Sbjct 291368 GACACAATTGAGAACGTGAAAGCGAAGATTCAAGATAAGGAAGGCATCCCACCTGACCAG 291309 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | |||||| | || |||||||| || || || | |||||| | ||||| || Sbjct 291308 CAACGCCTTATTTTCGCTGGCAAACAACTAGAGGACGGTCGTACTTTGTCTGATTACAAC 291249 Query 391230 AT 391231 || Sbjct 291248 AT 291247 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||||||| || ||||| || || || || || | | Sbjct 291656 ATGCAGATTTTTGTGAAGACGCTGACTGGCAAGACTATCACCCTCGAGGTCGAGGCCAGT 291597 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | ||| || ||||||||||||||||| || || ||||| || Sbjct 291596 GACACAATTGAGAACGTGAAAGCGAAGATTCAAGATAAGGAAGGCATCCCACCTGACCAG 291537 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | |||||| | || |||||| | ||||| || | || ||| | || || || Sbjct 291536 CAACGCCTTATTTTCGCTGGCAAACAATTGGAAGACGGTCGTACATTGTCTGACTACAAC 291477 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || | || |||||| |||| Sbjct 291476 ATCCAGAAAGAATCTACCCTTCACCTAGT 291448 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||||||| || ||||| || || || || || | | Sbjct 291884 ATGCAGATTTTTGTGAAGACGCTGACTGGCAAGACTATCACCCTCGAGGTCGAGGCCAGT 291825 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | ||| || ||||||||||||||||| || || ||||| || Sbjct 291824 GACACAATTGAGAACGTGAAAGCGAAGATTCAAGATAAGGAAGGCATCCCACCTGACCAG 291765 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | |||||| | || |||||| | ||||| || | || ||| | || || || Sbjct 291764 CAACGCCTTATTTTCGCTGGCAAACAATTGGAAGACGGTCGTACATTGTCTGACTACAAC 291705 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || | || |||||| |||| Sbjct 291704 ATCCAGAAAGAATCTACCCTTCACCTAGT 291676 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||||||| || ||||| || || || || || | | Sbjct 292112 ATGCAGATTTTTGTGAAGACGCTGACTGGCAAGACTATCACCCTCGAGGTCGAGGCCAGT 292053 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | ||| || ||||||||||||||||| || || ||||| || Sbjct 292052 GACACAATTGAGAACGTGAAAGCGAAGATTCAAGATAAGGAAGGCATCCCACCTGACCAG 291993 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | |||||| | || |||||||| || || || | || ||| | || || || Sbjct 291992 CAACGCCTTATTTTCGCTGGCAAACAACTAGAGGACGGTCGTACATTGTCTGACTACAAC 291933 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || | || |||||| |||| Sbjct 291932 ATCCAGAAAGAATCTACCCTTCACCTAGT 291904 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||||||| || ||||| |||||||| || || | Sbjct 292340 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAGACTATCACTCTTGAGGTCGAGGCTAGC 292281 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | ||| || ||||||||||||||||| || || ||||| || Sbjct 292280 GACACAATTGAGAACGTGAAAGCGAAGATTCAAGATAAGGAAGGCATCCCACCTGACCAG 292221 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | |||||| | || |||||| | ||||| || | || ||| | || || || Sbjct 292220 CAACGCCTTATTTTCGCTGGCAAACAATTGGAAGACGGTCGTACATTGTCTGACTACAAC 292161 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || | || |||||| |||| Sbjct 292160 ATCCAGAAAGAATCTACCCTTCACCTAGT 292132 >seq1332 Length=523337 Score = 118 bits (130), Expect = 4e-21 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| |||||| |||| || ||||| || ||| | || || |||||| | Sbjct 494443 ATGCAGATATTCGTCAAAACATTGACAGGGAAAACCATAACTTTGGAAGTCGAATCAAGT 494384 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| ||| | | || |||||||| ||||||||||| ||||| || || ||| Sbjct 494383 GATACCATCGAAAATGTCAAGGCGAAAATTCAGGATAAGGAAGGGATTCCACCCGACCAA 494324 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 |||||| | ||||| ||||||| ||| | ||||| ||| | ||| Sbjct 494323 CAACGTCTGATTTTTGCAGGGAAGCAATTGGAAGACGGACGCACT 494279 Score = 111 bits (122), Expect = 6e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||| || || || || ||||| || ||||| | | Sbjct 494671 ATGCAGATTTTCGTGAAGACGTTGACAGGAAAGACCATAACTCTCGAGGTTGAGGCGAGT 494612 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | || || ||||||||||||||||| ||||| |||||||| Sbjct 494611 GATACCATCGAGAATGTGAAGGCTAAGATTCAAGATAAGGAAGGCATTCCACCTGATCAG 494552 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || |||||| | || ||||| || ||||||||| | ||| | | || || || Sbjct 494551 CAGCGCTTGATTTTCGCGGGCAAACAGCTAGAAGATGGACGCACTCTTTCTGACTACAAC 494492 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 494491 ATCCAAAAGGAATCGACTCTTCAC 494468 Score = 107 bits (118), Expect = 8e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| |||||||| || || || || ||||| ||||| || || || | | Sbjct 494215 ATGCAAATTTTTGTTAAAACGCTAACCGGAAAGACTATCACTCTGGAGGTCGAGGCTAGT 494156 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || ||||| || |||||||||||||| || |||||||| ||||| Sbjct 494155 GATACGATCGAGAACGTTAAAGCTAAGATTCAAGATAAGGAGGGCATTCCTCCAGATCAG 494096 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| ||||| |||| || || | ||||| || | ||| | | ||||| || Sbjct 494095 CAGCGTTTGATTTTTGCAGGCAAGCAGTTGGAAGACGGTCGCACTCTCTCTGATTACAAC 494036 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || ||||| || || Sbjct 494035 ATTCAAAAGGAATCCACTCTTCATTTGGT 494007 >seq2001 Length=220516 Score = 89.7 bits (98), Expect = 2e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 248488 CATGGACAAAAAGGAACAGTTGGTATTACTTTGCCACAAAGAGATATGCCTTTCACATCA 248547 ||||||||||| || || ||||||| | | |||| ||||||||| ||||| | Sbjct 142811 CATGGACAAAAGGGTACTTGTGGTATTCGGTACCGACAAGAAGATATGCCGTTCACTTGC 142870 Query 248548 GAAGGTATGACTCCAGATTTAATTTTCAATCCACATGGTATGCCTACACGTATGACTATG 248607 ||||| || ||||||||| ||||| |||| || || | ||| || | ||||||||||| Sbjct 142871 GAAGGCATTACTCCAGATATAATTATCAACCCCCACGCTATCCCCAGTCGTATGACTATC 142930 Query 248608 GGACAATTA 248616 || || ||| Sbjct 142931 GGCCACTTA 142939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975608335197584