Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1550 322 4e-82 seq1546 223 3e-52 seq1355 158 9e-33 >seq1550 Length=270027 Score = 322 bits (356), Expect = 4e-82 Identities = 958/1461 (66%), Gaps = 24/1461 (2%) Strand=Plus/Minus Query 517264 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 517323 |||||| || || ||||| || || | ||||| |||||||||||||| || | |||| Sbjct 32565 CACATTCAGGATTCCATTCGCGTCAATGTCAAACGTGACTTCAATTTGCGGTATACCTCG 32506 Query 517324 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 517383 |||| ||||| ||||| ||||| |||| |||||| || ||||| | || | Sbjct 32505 AGGAGCGGGTGGAATCCCAGACAAATCAAATTTTCCCAAGAGGTTGTTATCCCTGGTCAT 32446 Query 517384 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 517443 ||||| || ||| ||| || || ||| | | ||||| |||| || || || Sbjct 32445 GGCACGTTCGCCTTCGTAAACCTGTATCAAAACACCGGGCTGATTGTCTGCGTAGGTGGT 32386 Query 517444 AAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 517503 ||| | | || ||| || || || ||||||| | || | ||||| | Sbjct 32385 AAACGTTTGCGTTTGTTTTGTTGGGATAGTCGTGTTTCGTTTGATCAACGACGTCATCAC 32326 Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 ||| || || ||||| ||||| || || | ||| || ||||||| || | | | ||| Sbjct 32325 ACCTCCCGCAGTTTCCAAACCTAGGGACAAAGGTGTCACATCAAGTAACAGCAAGTCTTG 32266 Query 517564 AAGTTTTTCATCAGTTTGAC--CAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 517621 | | || | || ||| || |||||| || || |||| ||||| ||||| || Sbjct 32265 TACGGTATC--CGATTGGACTCCAGTAAGAATTGCGGCCTGAACGGCAGCTCCATAGGCT 32208 Query 517622 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGA 517681 || |||||||||||||| | || || || | | ||| || |||||||| | | ||| Sbjct 32207 ACTGCTTCATCAGGATTGATAGATTTGTTCAACTCTTTTCCGTTGAAAAACTCTTGAAGC 32148 Query 517682 AGTTGTCTTACCTTA-GGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 517740 | || ||| | || || || || | ||| || || || | ||||| ||||| | || Sbjct 32147 AATT-TCTGAATTTTCGGGATTCGGGTTGAACCACCCACGAGAACAATCTCATGAATTTG 32089 Query 517741 TGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAA 517800 | || | || ||| | ||| || ||||||| || || || | | || || Sbjct 32088 CGTCTTGTTCATTTTGGCATCTCTTAGCGCTTTTTCCACTGGGTCCAAAGTACTTCGGAA 32029 Query 517801 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCC 517860 ||| || | | ||||| |||||| || | ||||| ||| | | | || | ||| Sbjct 32028 CAAATCAGCATTGAGTTCCTCGAATCGGGCGCGAGTAATGGTGGTGTAAAAGTCCAGTCC 31969 Query 517861 TTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGC 517920 ||| || | ||||||| || | | | || | ||| | | ||||| || Sbjct 31968 TTCAAAAAGTGAATCAATCTCGACATTGGCCTGGGCACTTGAACTCAAAGTTCGTTTGGC 31909 Query 517921 ACGTTCACATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAAATCTGTT 517978 ||||||| | ||||| | |||| || | || || ||| | |||| | || | Sbjct 31908 ACGTTCAGAGGCTGTTCGCAGTCGACGCAGAGCGCGTTTATTTTCTGAT--AGGTCCTTC 31851 Query 517979 TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA--AGACGATTATCAAAATCTT 518036 || | ||||||||| || |||| || | ||| | || || || | || || || | Sbjct 31850 TTGTGTTTTCTCTTAAACTCTTGAATGAA--ATGGTTCACCAGTCGGGTGTCGAAGTCCT 31793 Query 518037 CACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAG 518096 | || ||||| | |||| || | || | | | |||| || | || ||||| | | Sbjct 31792 CCCCGCCCAAATGTGTATCACCGGCAGTGGATTTCACTTCAAATATGCCCTCTTCGATGG 31733 Query 518097 ACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT 518156 || | | |||||| |||||||||||| | |||||| || || || || |||| | Sbjct 31732 CCAGCACCGAGACATCAAAGGTTCCACCACCGAGATCAAAGATGAGAACGTTTCTTTCGT 31673 Query 518157 TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 518216 | || || ||||| || || ||||||| || || || ||||||||||| ||||| | Sbjct 31672 TATCGGCCTTCTTATCCAGGCCGTACGCAATGGCTGCTGCTGTTGGTTCATTGATAATCC 31613 Query 518217 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 518276 | ||| || ||||| ||||| | |||||||| || |||||||| ||||| ||| | Sbjct 31612 GTAGAACGTTTAGACCGGCAATCGTCCCTGCATCCTTCGTGGCTTGCCTTTGACTATCAT 31553 Query 518277 TAAAATATGCAGGAACAGTAATAACGGCATCAGTTAC-TTCTTTACCAATATAAGCGCTT 518335 | || || || || ||||| ||||| || ||| | || ||||| |||| ||| || | Sbjct 31552 TGAAGTAAGCCGGCACAGTGATAACTGCCTCACTGACGGTCTTTCCCAA-ATAGGCCTCT 31494 Query 518336 GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG--GGGAA--TATTG 518391 || ||| ||||| || | || | ||| || || || | || | ||| | || Sbjct 31493 GCAATTTCCTTCATCTTTGTCAACACCATCGAGGATATCTCCTCAGCAAAGAACGTTTTC 31434 Query 518392 CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTT 518451 ||| || | ||| ||| || | || | ||| || | | | ||| | | | Sbjct 31433 CTTTGA--CCTTT--GTATTCGACCTGAATTTTTGGCTTGCCATTTTCTTCAATCAGTGT 31378 Query 518452 AAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAA 518511 |||||||| ||| ||| ||| ||| | |||||| | | | ||| |||| Sbjct 31377 GAATGGCCACATTTTACGATCCTCTTGGACAGTGGGGTCATCATACCTACGACCGATTAG 31318 Query 518512 TCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATC 518571 || || ||||| || | || || | |||||| || ||| | || | || || ||||| Sbjct 31317 GCGCTTGGCATCGAAGACCGTGTTAGATGGATTCATAGCAACCTGGTTCTTAGCCGCATC 31258 Query 518572 TCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTG 518631 ||||||| | |||| ||||| ||||| | ||||| ||||||||||| || ||||| Sbjct 31257 ACCAATCAAACGTTCCGTCTCAGTAAAGGCCACATAACTAGGAGTTGTGCGGTTTCCTTG 31198 Query 518632 ATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGT 518691 ||||| ||||||||||| || || ||||| | ||||||||||| || || || Sbjct 31197 GTCATTTGCAATAATTTCCACCTTGTTGTTTTGGAACACACCTACACATGAGAACGTAGT 31138 Query 518692 TCCTAAATCAATACCAATAGC 518712 ||| | ||| || ||||| || Sbjct 31137 TCCCAGATCGATTCCAATCGC 31117 Score = 192 bits (212), Expect = 4e-43 Identities = 461/693 (67%), Gaps = 7/693 (1%) Strand=Plus/Minus Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 |||||||| ||||| ||||| |||| | || | || | ||| | | |||| |||| Sbjct 92964 CGATTATCGAAATCCTCACCACCCAGATGCGTGTCACCGGCCGTCGACTTCACTTCGAAA 92905 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 | ||||| || | | | || | ||||| || |||||||| | |||||| || Sbjct 92904 ACACCATCGTCGATCGTAAGAATGGAAACATCGAACGTACCACCACCGAGATCAAAGATC 92845 Query 518141 AGTACAT-TCATTT--CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 | |||| || | || | || || || | |||||| |||| |||||||| Sbjct 92844 AACACATGTCGCTCACCTCCACCCACCTTCTTGTCCAAACCATAAGCAATCGCAGCAGCT 92785 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 || ||||| || || |||| |||||| || || |||||||| | || ||||| || || Sbjct 92784 GTCGGTTCGTTGATGATTCGCAAAACGTTCAGGCCAGCAATGGTACCCGCATCCTTTGTC 92725 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCT 518317 ||||| | || ||||| || || || |||||||| || || ||||| | || | Sbjct 92724 GCTTGACGCTGGCTGTCGTTGAAGTAAGCCGGAACAGTGATCACAGCATCCTTCACCTTC 92665 Query 518318 TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377 |||| | || || || || | |||||||| | || | |||||| || || | Sbjct 92664 GTACCCAGGTACGCCTCGGCTGTCTCCTTCATTTTCGTCAACACCATTGAAGATATCTCC 92605 Query 518378 TCTG--GGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTAC 518435 |||| | |||| || |||| || | ||| ||| || | ||| ||| || Sbjct 92604 TCTGCCGAGAATGTT--TTGGTCTCCCCCTTGTATTCTACACGAACCTTTGGCTTACCAC 92547 Query 518436 CAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAA 518495 | | | || |||| || | ||| | ||| ||| || || | |||||| | Sbjct 92546 CTTCTTGGATCACTTCGAAAGACCAATGTTTACGATCAGACGTCACCGATGGGTCATCGA 92487 Query 518496 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT 518555 | | ||| || | | ||| ||||| || | ||| ||| ||||||| ||||| ||| Sbjct 92486 ATCGCCGACCTATCAGCCTTTTCGCATCGAACACAGTGTTGCTTGGATTGATTGCGACTT 92427 Query 518556 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 518615 ||| ||| || ||||| |||||||| |||| || || || || | |||||| || | Sbjct 92426 GATTTTTCGCGGCATCGCCAATCAGTCGTTCGGTATCCGTGAACGCAACATAGCTAGGTG 92367 Query 518616 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 518675 |||||||||| |||||||| || ||||| ||||| ||||| |||| ||| | || || | Sbjct 92366 TTGTGCGATTTCCTTGATCGTTGGCAATGATTTCTACTTTTCCATGTTGGAACACTCCAA 92307 Query 518676 CACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708 | || | | || || || ||||| || |||| Sbjct 92306 CGCACGAATATGTCGTACCCAAATCGATTCCAA 92274 Score = 181 bits (200), Expect = 8e-40 Identities = 929/1461 (64%), Gaps = 24/1461 (2%) Strand=Plus/Plus Query 517264 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 517323 |||||| |||||||| || ||||| | || || || || || || || ||||| || | Sbjct 73085 CACATTCAGAATACCGTTCGCATCTATGTCGAAAGTCACCTCGATCTGTGGGACTCCACG 73144 Query 517324 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 517383 | || || || ||||| || | ||| | |||| ||||| || ||| | Sbjct 73145 TGGGGCCGGAGGAATCCCCGACAGCTCGAATTTGCCCAACAGGTTATTGTCACGAGTCAT 73204 Query 517384 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 517443 || ||||| || | | |||||| || ||| ||||| || ||||| || || Sbjct 73205 CGCACGCTCACCTTCATACACTTGGATCAATACACCAGGCTGATTGTCCGAATAGGTCGT 73264 Query 517444 AAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 517502 ||| |||| | | ||| |||||||| ||||| | | || | | |||||| | Sbjct 73265 AAACG-TCTGCGTCTGTTTGGTTGGAATTGTGGTGTTCCGCTTGATCAAAGCGGTCATCA 73323 Query 517503 TACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTT 517562 |||||| || ||||| ||||| | || | |||| || || | || | | | | Sbjct 73324 CACCACCAGCGGTTTCCAAACCCAAGGACAACGGAGCTACGTCCAACAGAAGCAGGTCCT 73383 Query 517563 GAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 517622 | | || || | | ||| |||||||| || || | ||| |||||||| || | Sbjct 73384 GCACTTGCTCGGATTTATCGCCACTTAGAATAGCAGCCTGCACAGCGGCACCATAAGCGA 73443 Query 517623 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGA 517681 | || ||||| ||||| | | | || | | ||| |||||||| |||| |||| | Sbjct 73444 CGGCCTCATCCGGATTGATCGACTTGTTCAACTCTTTGCCATTGAAGAAATCCTGAAGCA 73503 Query 517682 AGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 517741 | || | | ||||| |||||||||| ||| || || || | ||||| ||||| | ||| Sbjct 73504 ACTTCTGT-ACCTTTGGAATACGAGTTGAACCACCGACAAGGACAATCTCATGGA--TGT 73560 Query 517742 GAT--TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT-CTA 517798 | || |||| |||| ||| ||| | || || || || || | ||| | Sbjct 73561 CCTGCTTGTCCATCTTTGCATCACGCAAAGCCTTCTCCACAGGGTCCATTGT-GCTACGG 73619 Query 517799 AACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAA 517856 |||| ||| | | || || || || || | |||| | || | || || || | Sbjct 73620 AACAGGTCGGCATTCAGCTCCTCAAAACGTGCACGGGTAATGG--ACGTGTAAAAGTCGA 73677 Query 517857 TTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAG---TCGAAGAAGATAGTGCAC 517913 | |||||||||| |||||| | || || | | ||| | ||||| || |||| Sbjct 73678 TACCTTCGAACAGAGAATCGATCTCGATGTTGGCTTGCGCACTCGAACTCAAT-GTGC-- 73734 Query 517914 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAA 517971 |||| || || || || || || | || | || | || || |||| | || | | | Sbjct 73735 GTTTTGCGCGCTCGCAAGCAGTGCGAAGACGACGAACAGCGCGTTTGTT--TTCACTAAT 73792 Query 517972 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 518031 ||| | || | ||| | |||||| || | || | | || | ||| |||| || Sbjct 73793 GTCTTTCTTGTGTTTCCGCTTGAACTCCTGAATGAAGTGATTCACCATACGGATATCGAA 73852 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091 ||| ||||| ||||| | ||| | ||||| |||| | || | ||| | || || || Sbjct 73853 ATCCTCACCGCCCAAGTGAGTGTCACCTGAGGTAGACTTCACCTCGAAGATGCCCTCCTC 73912 Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151 | | | || | ||||| || |||||||| | ||| ||||| || |||| | | Sbjct 73913 GATGGTAAGAATCGACACATCGAAAGTACCACCACCAAGATCGAAAATCAGAACATGCCT 73972 Query 518152 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 518211 || | ||||| || | || || |||| |||||||| || || || || || Sbjct 73973 CTCAGCACCAACCTTTTTGTCCAACCCGTATGCAATCGCAGCAGCCGTCGGCTCGTTGAT 74032 Query 518212 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 518271 ||| | | ||| || | || || | || ||||| || || ||||| | ||| Sbjct 74033 AATCCGCTGAACGTTTAAGTTGGCGATACGACCCGCATCCTTCGTAGCTTGACGTTGACT 74092 Query 518272 ATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331 || || || || ||||| ||||| | || ||||| | || | || | || || Sbjct 74093 GTCATTGAAGTAGGCAGGCACAGTGACGACTGCATCCTTCACGGTGGTGCCCAAGTAGGC 74152 Query 518332 GCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTG 518391 || | | |||||||| | |||| ||| | || || | ||| ||||| || Sbjct 74153 TTCGGCGATCTCCTTCATTTTCCCCAAAACCATAGCCGATATCTCTTCGGGGGAGAATGT 74212 Query 518392 CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTT 518451 ||| | || | || |||| || | || || | | || || | Sbjct 74213 CTTTGTCTCGCCTCTGTACTCCACTTGAATCTTCGGCTTGCCTTTGTCGTCAACGACACT 74272 Query 518452 AAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAA 518511 |||||||||| |||||| || ||||| || |||| || | ||| || || Sbjct 74273 GAATGGCCAGTGTTTCATGTCGGATTGCACCGAAGCATCATCGAATCGGCGACCGATCAA 74332 Query 518512 TCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATC 518571 ||| || ||||| |||| || ||||||||||| || ||| | || | || |||||||| Sbjct 74333 TCGCTTGGCATCGAAAACGGTGTTGGTTGGATTCATCGCAACCTGGTTCTTAGCTGCATC 74392 Query 518572 TCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTG 518631 || || || |||| || || ||||| | ||||| ||||||||||| || ||||| Sbjct 74393 ACCGATGAGGCGTTCGGTGTCGGTAAACGCCACATAACTCGGAGTTGTGCGGTTTCCTTG 74452 Query 518632 ATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGT 518691 || || ||||| || || || || |||| || | || || || || | | ||||| Sbjct 74453 GTCGTTGGCAATGATCTCGACCTTCCCATGCTGGAACACTCCGACGCAGGAATAGGTTGT 74512 Query 518692 TCCTAAATCAATACCAATAGC 518712 || ||||| || |||||||| Sbjct 74513 GCCCAAATCGATTCCAATAGC 74533 >seq1546 Length=268189 Score = 223 bits (246), Expect = 3e-52 Identities = 741/1137 (65%), Gaps = 23/1137 (2%) Strand=Plus/Minus Query 517589 AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCA 517648 ||||| || || || | ||||| ||||| ||||| || ||||| ||||| | | | Sbjct 179105 AGAATCGCAGCCTGTACTGCAGCCCCATACGCAACCGCCTCATCCGGATTGATCGACTTG 179046 Query 517649 TTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGA 517707 || | | ||||||||||| |||| ||| || | ||| ||||| || || |||| Sbjct 179045 TTCAACTCCTTACCATTGAAGAAATCCTGAAGCAGCT-TCTGCACCTTCGGGATTCGAGT 178987 Query 517708 TGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAA 517767 || || || || || ||||| ||||| | || || |||| || | ||| || Sbjct 178986 CGAACCACCCACCAACACAATGTCATGAATCTCACTCTTGTCCATCTTCGCATCGCGCAA 178927 Query 517768 AACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTT 517827 | | || || || || ||||| | | |||| ||||| | || || || || Sbjct 178926 AGCCTTCTCCACCGGGTCAAGCGTACCACGGAACAGGTCTGCATTCAGCTCCTCAAACCG 178867 Query 517828 AGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATC 517885 ||| | ||| || ||| | || || ||||| || ||| |||| || |||| ||||| Sbjct 178866 AGCACGAGT--GATCGACGTGTAGAAATCAATACCCTCGTACAACGAGTCAATCTCAATG 178809 Query 517886 GTAGTTTGAG---TCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGT 517942 | | || | ||||| | ||||| | |||||||||||||| || |||| || Sbjct 178808 TTCGCCTGCGCACTCGAACTCAA-AGTGCGC--TTAGCACGTTCACACGCAGTCCGAAGG 178752 Query 517943 CTTCGTAAGGCT--TTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTT 518000 | || | || |||| || || | || | || | || | || || || | Sbjct 178751 CGACGGACAGCACGTTTGTTGTCCGAA--ATGTCCTTCTTGTGCTTGCGTTTAAACTCCT 178694 Query 518001 CAACACACCATG--TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCC 518058 || | | ||| | || | |||||||| ||||| ||||| ||||| | || | || Sbjct 178693 GAATAAA--ATGACTCACCATCCGATTATCGAAATCCTCACCACCCAAATGCGTGTCACC 178636 Query 518059 TGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGT 518118 | ||| | | |||| ||| | ||||| || | | | | | |||||| || Sbjct 178635 GGCCGTCGACTTCACTTCGAATACACCATCGTCGATCGTGAGGATGGAAACATCAAATGT 178576 Query 518119 TCCACCACCCATATCAAAAATAAGTACAT-TCATTT--CTTTGTCTTGGTTTTTATCAAG 518175 |||||||| | |||||| || || || | || | |||| | || || || || Sbjct 178575 ACCACCACCAAGATCAAATATCAGCACGTGTCGCTCACCTTTACCCACCTTCTTGTCTAG 178516 Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235 || || |||| |||||||| || ||||| || || || | ||||||||| ||| |||| Sbjct 178515 CCCGTATGCAATCGCAGCAGCTGTCGGTTCGTTGATGATACGCAAAACATTCAGAGCAGC 178456 Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 ||| || ||||| || || ||||| | ||| ||||||||||| || |||||||| Sbjct 178455 AATGGCACCCGCATCCTTCGTCGCTTGACGTTGACTGTCGTTAAAATAAGCCGGAACAGT 178396 Query 518296 AATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACT 518355 ||| || ||||| | |||| | |||| ||| || || || | ||||| ||| | Sbjct 178395 AATCACAGCATCCTTCACTTTCGTGCCAAGATATGCCTCGGCTGTCTCCTTCATCTTAGT 178336 Query 518356 TAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATAC 518415 || | ||| || || || | ||||| || || |||| ||| || || || Sbjct 178335 CAACACCATCGACGATATCTCCTCTGGCGAGAATGTCTTGATCTCACCTTTGTACTCCAC 178276 Query 518416 TTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGA 518475 | | ||| || ||| | | | |||| ||| | ||||| ||| || || Sbjct 178275 ACGGACCTTTGGCTTGCCACCTTCTTGGACTACTTCAAAAGACCAGTGTTTACGGTCAGA 178216 Query 518476 TTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATT 518535 || | |||| || | ||| || |||| || |||| || | || || Sbjct 178215 CGTCACCGACGGATCATCGAATCGCCGACCGATCAATCTCTTGACATCGAACACGGTGTT 178156 Query 518536 GGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT 518595 | | ||||| ||||| |||||| ||| || ||||| |||||||| |||| || ||||| Sbjct 178155 GTTCGGATTCATTGCGACTTGATTTTTAGCGGCATCACCAATCAGTCGTTCGGTATCTGT 178096 Query 518596 AAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTT 518655 ||||| |||||| || ||||||||||| |||||||| || ||||| ||||| ||||| Sbjct 178095 AAATGCAACATAGCTGGGTGTTGTGCGATTTCCTTGATCGTTGGCAATGATTTCCACTTT 178036 Query 518656 ACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 |||| ||| | || || || || | | || || || | ||| || |||| ||| Sbjct 178035 TCCATGTTGGAACACTCCAACGCATGAATATGTCGTACCCAGATCGATTCCAACAGC 177979 >seq1355 Length=477810 Score = 158 bits (174), Expect = 9e-33 Identities = 350/519 (67%), Gaps = 7/519 (1%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 |||||||| | ||| || || | |||||||| || |||||||| || |||| ||| || Sbjct 108756 TTTTTATCCAAACCGTATGCGATGGCAGCAGCCGTAGGTTCATTGATTATTCGCAACACT 108697 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || |||||||| || || ||||| || |||||||| | |||| ||||||||| || Sbjct 108696 TTTAGACCAGCGATGACACCAGCATCCTTTGTGGCTTGACGCTGTGCATCGTTAAAGTAG 108637 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 || ||||||||||| ||||| | || ||| ||| || | |||||| || ||| Sbjct 108636 GCGGGAACAGTAATGACGGCGTGCGTGACTGGTTTGCCCAAATAAGCTTCAGCACTTTCC 108577 Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG-GGAATATTGCTTGGATTCATT 518403 ||||| |||| | | ||||| || |||| ||| || | || ||| | | ||| Sbjct 108576 TTCATCTTACCGAGGACCATTGCCGATATTTCTTCCGGAGCAAACGTGCGT-GTTTCCGA 108518 Query 518404 TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTA 518463 | || | || |||||||| | ||||||||| |||| || | | Sbjct 108517 GCCAACCTTCACCTGAATGTATGGTTTGTCGTTCTTGTTAATAACTGTAAACGGGAAATG 108458 Query 518464 TTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523 || ||||| |||||| | ||||| || || ||||| | ||| || | || Sbjct 108457 CTTGATATCCTTTTGAACGGACTCCTCATTGAACGTTCGGCCAATGAGTCGCTTCACGTC 108398 Query 518524 AAAAATAGTATTGGTTGGATTAATTG-CAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 ||||| ||||| || || | | |||| |||| ||| || |||||||| | || Sbjct 108397 GAAAATGGTATTTTCCGGGTTTGTCGTCAGC-TGATTTTTCGCAGCATCTCCGACAAGCC 108339 Query 518583 GTTCTGTCT---CTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 518639 |||| || |||| |||| ||||| || || || | ||||| ||||||||||| | Sbjct 108338 GTTCACCCTCGGCTGTGAATGCGACATACGACGGTGTAATCCGATTTCCTTGATCATTTG 108279 Query 518640 CAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 518678 |||| ||||| || ||||| || | ||||| |||| Sbjct 108278 CAATTATTTCCACCCGTCCATTCTGAAACACACCAACAC 108240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780606637917688