Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1550 439 3e-118 seq1546 329 4e-85 seq1355 149 8e-31 seq2115 87.8 2e-12 >seq1550 Length=270027 Score = 439 bits (486), Expect = 3e-118 Identities = 1060/1592 (67%), Gaps = 28/1592 (2%) Strand=Plus/Minus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCT-TCTTTCG 6626 |||||| || |||| || ||||| || ||||| ||||| || ||||| | Sbjct 32691 TTCATCCTCGGCTTTGTAGCGCTCCGCGTCAGAAACCATTCGGTCAATCTCCGTCTTT-G 32633 Query 6627 ATAATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCT 6685 | || | |||||||| || || || || ||||| ||| | |||||| | ||| || Sbjct 32632 ACAAACGACCCTTATCGTTGGTGATTGTTATCTTGTTCTG-TTTACCTGTACTCTTGTCC 32574 Query 6686 TCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGT 6745 | || ||||||| || ||||| || |||| || ||| | || | |||||| ||| Sbjct 32573 ACTGCGGACACATTCAGGATTCCATTCGCGTCAATGTCAAACGTGACTTCAATTTGCGGT 32514 Query 6746 GTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCC 6805 |||| | || |||| |||||| || | ||||||||| | || | | |||||||| Sbjct 32513 ATACCTCGAGGAGCGGGTGGAATCCCAGACAAATCAAATTTTCCCAAGAGGTTGTTATCC 32454 Query 6806 GTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGT 6865 | | | | |||||| ||||| || || | || || | || ||||| ||| Sbjct 32453 CTGGTCATGGCACGTTCGCCTTCGTAAACCTGTATCAAAACACCGGGCTGATTGTCTGCG 32394 Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 || | || |||| || || | ||| || ||||| |||| || | || Sbjct 32393 TAGGTGGTAAACGTTTGCGTTTGTTTTGTTGGGATAGTCGTGTTTCGTTTGATCAACGAC 32334 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | ||| ||| |||||| | || || |||| ||||||||| || | ||||| Sbjct 32333 GTCATCACACCTCCCGCAGTTTCCAAACCTAGGGACAAAGGTGTCACATCAA---GTAAC 32277 Query 6986 AG---GTCTTGAACAG-ATTCGTTCCCTTCAC-CCGTTAAGA-TGGCGGCTTGGACCGTC 7039 || |||||| || | || || | | || || ||||| | ||||| || || | Sbjct 32276 AGCAAGTCTTGTACGGTATCCGAT---TGGACTCCAGTAAGAATTGCGGCCTGAACGGCA 32220 Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | ||| |||| ||||| ||||| ||| Sbjct 32219 GCTCCATAGGCTACTGCTTCATCAGGATTGATAGATTTGTTCAACTCTTTTCCGTTGAAA 32160 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | || | || || ||||||||||||||||| || || ||||| || | ||| || Sbjct 32159 AACTCTTGAAGCAATTTCTGAATTTTCGGGATTCGGGTTGAACCACCCACGAGAACAATC 32100 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | || || || | || || | |||| || | |||||| || || |||| | Sbjct 32099 TCATGAATTTGCGTCTTGTTCATTTTGGCATCTCTTAGCGCTTTTTCCACTGGGTCCAAA 32040 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 | |||||||| || | |||||||| || || || || ||||||| || || Sbjct 32039 GTACTTCGGAACAAATCAGCATTGAGTTCCTCGAATCGGGCGCGAGTAATGGTGGTGTAA 31980 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | || || | | |||||||| || | | | || || | ||| || Sbjct 31979 AAGTCCAGTCCTTCAAAAAGTGAATCAATCTCGACATTGGCCTGGGCACTTGAACTCAAA 31920 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 ||||| || || || ||| | || ||||| | ||||| || || || || | || Sbjct 31919 GTTCGTTTGGCACGTTCAGAGGCTGTTCGCAGTCGACGCAGAGCGCGTTTATTTTCTGAT 31860 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 | || ||||| ||||| | |||||||||| | ||| || | |||| | ||| Sbjct 31859 AGGTCCTTCTTGTGTTTTCTCTTAAACTCTTGAATGAAATGGTTCACCAGTCGGGTGTCG 31800 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || || || || ||||| |||||||| || || || | ||| |||||||| || || || Sbjct 31799 AAGTCCTCCCCGCCCAAATGTGTATCACCGGCAGTGGATTTCACTTCAAATATGCCCTCT 31740 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 || ||| | || ||| |||||||| || |||||||| || ||||| ||||| ||||| Sbjct 31739 TCGATGGCCAGCACCGAGACATCAAAGGTTCCACCACCGAGATCAAAGATGAGAACGTTT 31680 Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639 | |||| || |||||||| || |||||||| || || || || ||||||||||| Sbjct 31679 CTTTCGTTATCGGCCTTCTTATCCAGGCCGTACGCAATGGCTGCTGCTGTTGGTTCATTG 31620 Query 7640 ATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699 ||||| || ||| ||| || || ||||| || | ||||| ||||| ||||| | ||| Sbjct 31619 ATAATCCGTAGAACGTTTAGACCGGCAATCGTCCCTGCATCCTTCGTGGCTTGCCTTTGA 31560 Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759 ||| || ||||| ||||| || || | || || || |||| |||| || | ||| Sbjct 31559 CTATCATTGAAGTAAGCCGGCACAGTGATAACTGCCTCACTGACGGTCTTTCCCAAATAG 31500 Query 7760 GATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAAC 7819 | || || || || ||||| || || | |||||||| || ||||| ||||| ||| Sbjct 31499 GCCTCTGCAATTTCCTTCATCTTTGTCAACACCATCGAGGATATCTCCTCAGCAAAGAAC 31440 Query 7820 TGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT---ATCCGCAGCACCGGGG 7876 |||| ||| ||| || | || || | ||| | || || || | || Sbjct 31439 GTTTTCCTTTGACCTTTGTATTCGACCTGAATTTTTGGCTTGCCATTTTCTTCA------ 31386 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || | | | | ||| ||| ||| |||||||| |||| | || | | Sbjct 31385 ATCAGTGTGAATGGCCACATTTTACGATCCTCTTGGACAGTGGGGTCATCATACCTACGA 31326 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| || ||||| ||||| || || ||||| || ||||| || |||||||| Sbjct 31325 CCGATTAGGCGCTTGGCATCGAAGACCGTGTTAGATGGATTCATAGCAACCTGGTTCTTA 31266 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 ||||| || || || | |||||| | || ||||| || || || || || || Sbjct 31265 GCCGCATCACCAATCAAACGTTC---CGTCTCAGTAAAGGCCACATAACTAGGAGTTGTG 31209 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || |||||||| || ||||||||||| || || |||||| | || || || || Sbjct 31208 CGGTTTCCTTGGTCATTTGCAATAATTTCCACCTTGTTGTTTTGGAACACACCTACACAT 31149 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || |||| ||||| | ||| || || || || Sbjct 31148 GAGAACGTAGTTCCCAGATCGATTCCAATCGC 31117 Score = 378 bits (418), Expect = 9e-100 Identities = 1042/1586 (66%), Gaps = 12/1586 (1%) Strand=Plus/Plus Query 6566 TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTC 6625 |||||||| || | || ||||| ||||||||| |||||| ||||| || || ||| Sbjct 72957 TTTTCATCATCGGCCTTGTACTTCTCCGCATCTGCCACCATCCGGTCAATCTCATCCTTC 73016 Query 6626 GATAATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATC 6684 ||||| | ||||| |||||||| || || ||||| ||| | || ||||| | ||| || Sbjct 73017 GATAAACGACCCTTGTCATTCGTGATGGTTATCTTGTTCTGCTT-ACCCGTGCTCTTGTC 73075 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 | || ||||||| |||||| || ||||| | ||||| | || | || ||||| Sbjct 73076 CACCGCCGACACATTCAGAATACCGTTCGCATCTATGTCGAAAGTCACCTCGATCTGTGG 73135 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 || | || || | ||||| |||| | || ||| | || | | | || || Sbjct 73136 GACTCCACGTGGGGCCGGAGGAATCCCCGACAGCTCGAATTTGCCCAACAGGTTATTGTC 73195 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 | | || ||| ||||||||||| |||| || || |||| ||||| || Sbjct 73196 ACGAGTCATCGCACGCTCACCTTCATACACTTGGATCAATACACCAGGCTGATTGTCCGA 73255 Query 6865 TGCCGTTGAGAAGATTTGT-TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || | || | || ||| | || | |||||| || || || | | || | | Sbjct 73256 ATAGGTCGTAAACGTCTGCGTCTGT-TTGGTTGGAATTGTGGTGTTCCGCTTGATCAAAG 73314 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 |||||| | |||||| ||||| | || | |||| || | |||||||| || | Sbjct 73315 CGGTCATCACACCACCAGCGGTTTCCAAACCCAAGGACAACGGAGCTACGTCCAACAGAA 73374 Query 6984 ACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCC 7043 |||||| || || ||| || || ||| || || || || || | || | Sbjct 73375 GCAGGTCCTGCACTTGCTCGGATTTATCGCCACTTAGAATAGCAGCCTGCACAGCGGCAC 73434 Query 7044 CGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAAT 7103 | || ||||| |||||||| || || |||| || |||| ||||| || || || ||| Sbjct 73435 CATAAGCGACGGCCTCATCCGGATTGATCGACTTGTTCAACTCTTTGCCATTGAAGAAAT 73494 Query 7104 CCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163 || | || | || | || || || || || || |||||||| | || || |||| Sbjct 73495 CCTGAAGCAACTTCTGTACCTTTGGAATACGAGTTGAACCACCGACAAGGACAATCTCAT 73554 Query 7164 TCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223 | | | || || ||||||| || || | | || || ||||| ||||| Sbjct 73555 GGATGTCCTGCTTGTCCATCTTTGCATCACGCAAAGCCTTCTCCACAGGGTCCATTGTGC 73614 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 ||||||||| ||| | ||| |||||||||||||||||||||||||| || || || | Sbjct 73615 TACGGAACAGGTCGGCATTCAGCTCCTCAAAACGTGCACGGGTAATGGACGTGTAAAAGT 73674 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343 | | || ||| | | ||||| || || ||| | | ||| || ||||| || || | Sbjct 73675 CGATACCTTCGAACAGAGAATCGATCTCGATGTTGGCTTGCGCACTCGAACTCAATGTGC 73734 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 | ||||||||||| || || || || | |||||||| || || ||| | ||| | Sbjct 73735 GTTTTGCGCGCTCGCAAGCAGTGCGAAGACGACGAACAGCGCGTTTGTTTTCACTAATGT 73794 Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 ||||||| ||||| || || ||||| | | |||||| | | | |||||||| Sbjct 73795 CTTTCTTGTGTTTCCGCTTGAACTCCTGAATGAAGTGATTCACCATACGGATATCGAAAT 73854 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 | ||||| |||||||| || || || | ||| | || || || ||||| || | || | Sbjct 73855 CCTCACCGCCCAAGTGAGTGTCACCTGAGGTAGACTTCACCTCGAAGATGCCCTCCTCGA 73914 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 || | | | ||| ||||| || ||||||||||| || || ||||| || || | | | | Sbjct 73915 TGGTAAGAATCGACACATCGAAAGTACCACCACCAAGATCGAAAATCAGAACATGCCTCT 73974 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | | | || || || | ||||| || || || || ||||| || || || |||| Sbjct 73975 CAGCACCAACCTTTTTGTCCAACCCGTATGCAATCGCAGCAGCCGTCGGCTCGTTGATAA 74034 Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703 | || || ||| | | || ||| ||||||| ||||| ||||| ||||| | Sbjct 74035 TCCGCTGAACGTTTAAGTTGGCGATACGACCCGCATCCTTCGTAGCTTGACGTTGACTGT 74094 Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 | || |||||||| || || || ||||| || ||| | || | | || | || | || Sbjct 74095 CATTGAAGTAGGCAGGCACAGTGACGACTGCATCCTTCACGGTGGTGCCCAAGTAGGCTT 74154 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT- 7822 | ||||| || |||||||| | |||||| | || |||||||| | | | | ||| Sbjct 74155 CGGCGATCTCCTTCATTTTCCCCAAAACCATAGCCGATATCTCTTC-GGGGGAGAATGTC 74213 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACC 7882 || || || || | | || |||| |||| | || || || | || | || Sbjct 74214 TTTGTCTCGCCTCTGTACTCCACTTGAATCTTCGGCTT-GCCTTTG--TCGTCAACGACA 74270 Query 7883 TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATA 7942 | | | ||| | |||||| ||| ||| ||| || || | ||||| Sbjct 74271 CTGAATGGCCAGTGTTTCATGTCGGATTGCACCGAAGCATCATCGAATCGGCGACCGATC 74330 Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002 | ||||| ||||| ||||| ||||| | || ||||| || |||||||| || || Sbjct 74331 AATCGCTTGGCATCGAAAACGGTGTTGGTTGGATTCATCGCAACCTGGTTCTTAGCTGCA 74390 Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062 || ||||| || ||||| | || |||||||| || || || || || || || Sbjct 74391 TCACCGATGAGGCGTTC---GGTGTCGGTAAACGCCACATAACTCGGAGTTGTGCGGTTT 74447 Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122 ||||||||||| ||||| || || || | | || | || |||||||| ||||| Sbjct 74448 CCTTGGTCGTTGGCAATGATCTCGACCTTCCCATGCTGGAACACTCCGACGCAGGAATAG 74507 Query 8123 GTTGTTCCTAAATCAATACCGATTGC 8148 ||||| || ||||| || || || || Sbjct 74508 GTTGTGCCCAAATCGATTCCAATAGC 74533 Score = 311 bits (344), Expect = 1e-79 Identities = 626/922 (68%), Gaps = 11/922 (1%) Strand=Plus/Minus Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATC 7284 |||||||| ||| | ||| |||||||| || ||||| || ||||| || |||||||| Sbjct 93190 ACGGAACAGGTCTGCATTCAGCTCCTCAAACCGAGCACGTGTGATGGACGTGTAGAAATC 93131 Query 7285 AACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCG 7344 || || ||||| ||||| ||||| |||||| | | || || ||||| || || || Sbjct 93130 AATACCCTCGTACAACGAGTCAATCTCAATGTTCGCCTGCGCACTCGAACTCAAAGTGCG 93071 Query 7345 CTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC 7404 |||||| || |||||||| || || | || || | ||||| ||| | ||||| || Sbjct 93070 CTTTGCACGTTCACACGCAGTCCGAAGGCGTCGGACAGCACGTTTGTTGTCCGAAATGTC 93011 Query 7405 TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATC 7464 ||||| || || ||||||||||||| || || | | | || ||||||||| Sbjct 93010 CTTCTTGTGCTTGCGTTTAAACTCTTGGATAAAATGACTCACCATTCGATTATCGAAATC 92951 Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAAT 7524 |||||||||| || || || || || |||| || ||||| || | ||| | || || Sbjct 92950 CTCACCACCCAGATGCGTGTCACCGGCCGTCGACTTCACTTCGAAAACACCATCGTCGAT 92891 Query 7525 GTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT-TCG--T 7581 | | | |||||||| |||||||||||||| || ||||| || | || | ||| Sbjct 92890 CGTAAGAATGGAAACATCGAACGTACCACCACCGAGATCAAAGATCAACACATGTCGCTC 92831 Query 7582 ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641 | | | | ||||| || | ||| || || || || || || || ||||| || || Sbjct 92830 ACCTCCACCCACCTTCTTGTCCAAACCATAAGCAATCGCAGCAGCTGTCGGTTCGTTGAT 92771 Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 || || | | ||||||||||||||| || ||||||| || |||||||| || || Sbjct 92770 GATTCGCAAAACGTTCAGGCCAGCAATGGTACCCGCATCCTTTGTCGCTTGACGCTGGCT 92711 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| ||||| ||||| || || | || || ||| | || ||| |||| || |||| Sbjct 92710 GTCGTTGAAGTAAGCCGGAACAGTGATCACAGCATCCTTCACCTTCGTACCCAGGTACGC 92651 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || || | || |||||||| || | ||||| || || ||||| || |||| || Sbjct 92650 CTCGGCTGTCTCCTTCATTTTCGTCAACACCATTGAAGATATCTCCTCTGCCGAGAATGT 92591 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881 ||| || || || || | || || || | | || ||| || | | |||| || Sbjct 92590 TTTGGTCTCCCCCTTGTATTCTACACGAACCTTTGGCTTA---CCACCTTCTTGGATCAC 92534 Query 7882 CTTATACGACCAATCTTTCATATC-GTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 | | ||||||| ||| ||| | | | ||| | |||| || | || | Sbjct 92533 TTCGAAAGACCAATGTTTACGATCAGACGT-CACCGATGGGTCATCGAATCGCCGACCTA 92475 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 | || | || ||||| || || ||||| | || || || || ||| || ||||| | Sbjct 92474 TCAGCCTTTTCGCATCGAACACAGTGTTGCTTGGATTGATTGCGACTTGATTTTTCGCGG 92415 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 | || || || || ||||| || ||||| ||||| || || || || || |||| Sbjct 92414 CATCGCCAATCAGTCGTTCGGTA---TCCGTGAACGCAACATAGCTAGGTGTTGTGCGAT 92358 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120 | ||||| ||||| ||||| |||||||| | | ||| | || || |||||||||| Sbjct 92357 TTCCTTGATCGTTGGCAATGATTTCTACTTTTCCATGTTGGAACACTCCAACGCACGAAT 92298 Query 8121 ACGTTGTTCCTAAATCAATACC 8142 | || || || ||||| || || Sbjct 92297 ATGTCGTACCCAAATCGATTCC 92276 Score = 288 bits (318), Expect = 1e-72 Identities = 685/1026 (67%), Gaps = 27/1026 (3%) Strand=Plus/Minus Query 7135 TGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT-TTATCGATCTTTGAGTCTC 7193 |||||| ||||| ||||| || || |||| | | || | || || ||||| | || | Sbjct 132538 TGTCGAACCACCAACCAACACAATGTCATGAA-TCTCACTCTTGTCCATCTTCGCATCAC 132480 Query 7194 GAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTCCT 7250 | | | || || || || || | ||| |||||||| ||| | ||| |||| Sbjct 132479 GCAAAGCCTTCTCCACCGGGTCAAGCGTACC---ACGGAACAGGTCTGCATTCAGCTCCT 132423 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 |||| || ||||| || ||||| || |||||||||| || ||||| ||||| ||||| | Sbjct 132422 CAAACCGAGCACGTGTGATGGACGTGTAGAAATCAATACCCTCGTACAACGAGTCAATCT 132363 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 ||||| | | || || ||||| || || |||||||| || |||||||| || || | Sbjct 132362 CAATGTTCGCCTGCGCACTCGAACTCAAAGTGCGCTTTGCACGTTCACACGCAGTCCGAA 132303 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 || || | ||||| ||| | ||||| || ||||| || || ||||||||||||| Sbjct 132302 GGCGTCGGACAGCACGTTTGTTGTCCGAAATGTCCTTCTTGTGCTTGCGTTTAAACTCTT 132243 Query 7431 CAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCG 7490 || || | | | || ||||||||| |||||||||| || || || || | Sbjct 132242 GGATAAAATGACTCACCATTCGATTATCGAAATCCTCACCACCCAGATGCGTGTCACCGG 132183 Query 7491 CGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTAC 7550 | |||| || ||||| || | ||| | || || | | | |||||||| ||||||| Sbjct 132182 CCGTCGACTTCACTTCGAAAACACCATCGTCGATCGTAAGAATGGAAACATCGAACGTAC 132123 Query 7551 CACCACCCAGGTCAAAAATGAGTACGT-TCG--TATCGTCGTCTTTGTTCTTATCGAGAC 7607 ||||||| || ||||| || | || | ||| | | | | ||||| || | || Sbjct 132122 CACCACCGAGATCAAAGATCAACACATGTCGCTCACCTCCACCCACCTTCTTGTCCAAAC 132063 Query 7608 CGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAA 7667 | || || || || || || || ||||| || || || || | | |||||||||||||| Sbjct 132062 CATAAGCAATCGCAGCAGCTGTCGGTTCGTTGATGATTCGCAAAACGTTCAGGCCAGCAA 132003 Query 7668 TAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTA 7727 | | ||||||| || |||||||| || || ||||| ||||| ||||| || || | Sbjct 132002 TGGCACCCGCATCCTTTGTCGCTTGACGCTGGCTGTCGTTGAAGTAAGCCGGAACAGTGA 131943 Query 7728 CGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAA 7787 || || ||| | || ||| |||| || || | || || | || |||||||| || | Sbjct 131942 TCACAGCATCCTTCACCTTCGTACCCAGGTATGCCTCGGCTGTCTCCTTCATTTTCGTCA 131883 Query 7788 GAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 ||||| || || ||||| || |||| || ||| || || || || | || || Sbjct 131882 ACACCATTGAAGATATCTCCTCTGCCGAGAATGTTTTGGTCTCCCCCTTGTATTCTACAC 131823 Query 7848 CAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT-----TCAT 7902 || | | || ||| || | | ||||||| | | ||||||| || ||| Sbjct 131822 GAACCTTTGGCTTA---CCACCTTCTTGGATAACATCGAAAGACCAATGTTTACGGTCAG 131766 Query 7903 ATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAAC 7962 | |||| ||| | | || || | ||||| || | || |||| || || Sbjct 131765 A-CGTC----ACCGATGGATCATCGAATCGCCGGCCGATTAGCCTTTTCACATCGAACAC 131711 Query 7963 TGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATT 8022 ||||| | || || || || ||| || ||||| || || || || || ||||| | Sbjct 131710 AGTGTTGCTTGGATTGATCGCGACTTGATTTTTCGCGGCATCGCCAATCAGTCGTTCGGT 131651 Query 8023 ATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAAT 8082 | ||||| ||||| || || || ||||| ||||| ||||| ||||| ||||| || Sbjct 131650 A---TCCGTGAACGCAACATAGCTAGGTGTCGTGCGATTTCCTTGATCGTTGGCAATGAT 131594 Query 8083 TTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 ||| || | | ||| | || || || ||||| || || || || | ||| || || Sbjct 131593 TTCCACTTTTCCATGTTGGAACACTCCAACACACGAGTATGTAGTACCCAGATCGATCCC 131534 Query 8143 GATTGC 8148 | ||| Sbjct 131533 AACTGC 131528 >seq1546 Length=268189 Score = 329 bits (364), Expect = 4e-85 Identities = 770/1141 (67%), Gaps = 43/1141 (4%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 || || || || || | ||||| || || ||||||||||| || || |||| || ||| Sbjct 179102 ATCGCAGCCTGTACTGCAGCCCCATACGCAACCGCCTCATCCGGATTGATCGACTTGTTC 179043 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || ||||| || || ||||| | || | || | ||||||||||| ||||| Sbjct 179042 AACTCCTTACCATTGAAGAAATCCTGAAGCAGCTTCTGCACCTTCGGGATTCGAGTCGAA 178983 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGAT-TTATCGATCTTTGAGTCTCGAAGTGT 7200 ||||| ||||| || || |||| | | || | || || ||||| | || || | | Sbjct 178982 CCACCCACCAACACAATGTCATGAA-TCTCACTCTTGTCCATCTTCGCATCGCGCAAAGC 178924 Query 7201 TTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACG 7257 || || || || || | ||| |||||||| ||| | ||| |||||||| || Sbjct 178923 CTTCTCCACCGGGTCAAGCGTACC---ACGGAACAGGTCTGCATTCAGCTCCTCAAACCG 178867 Query 7258 TGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGT 7317 ||||| || || || || |||||||||| || ||||| ||||| ||||| |||||| | Sbjct 178866 AGCACGAGTGATCGACGTGTAGAAATCAATACCCTCGTACAACGAGTCAATCTCAATGTT 178807 Query 7318 TGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACG 7377 | || || ||||| || || ||||| || || |||||||| || || | ||||| Sbjct 178806 CGCCTGCGCACTCGAACTCAAAGTGCGCTTAGCACGTTCACACGCAGTCCGAAGGCGACG 178747 Query 7378 AAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAA 7437 | ||||| ||| | ||||| || ||||| || || ||||||||||| | | || Sbjct 178746 GACAGCACGTTTGTTGTCCGAAATGTCCTTCTTGTGCTTGCGTTTAAACTCCTGAATAAA 178687 Query 7438 GTGTCGAAGGAGTCTCGA--ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTC 7495 || | | | || ||| ||||||||| ||||||||||| || || || || || ||| Sbjct 178686 ATGACTCACCA-TC-CGATTATCGAAATCCTCACCACCCAAATGCGTGTCACCGGCCGTC 178629 Query 7496 GCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCA 7555 | || ||||| || | ||| | || || | | | ||||||||||| ||||||||| Sbjct 178628 GACTTCACTTCGAATACACCATCGTCGATCGTGAGGATGGAAACATCAAATGTACCACCA 178569 Query 7556 CCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTT------GTTCTTATCGAGACCG 7609 || || ||||| || || |||| || | || |||| ||||| || || ||| Sbjct 178568 CCAAGATCAAATATCAGCACGT--GTCGC-TCACCTTTACCCACCTTCTTGTCTAGCCCG 178512 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAAT 7668 || || || || || || || ||||| || || ||||| || ||| ||||| ||||||| Sbjct 178511 TATGCAATCGCAGCAGCTGTCGGTTCGTTGATGATACGCAAAACA-TTCAGAGCAGCAAT 178453 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | ||||||| ||||||||||| ||||| |||||||| || ||||| || || | Sbjct 178452 GGCACCCGCATCCTTCGTCGCTTGACGTTGACTGTCGTTAAAATAAGCCGGAACAGTAAT 178393 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 || || ||| | |||||| | || ||||| | || || | || ||||| || || | Sbjct 178392 CACAGCATCCTTCACTTTCGTGCCAAGATATGCCTCGGCTGTCTCCTTCATCTTAGTCAA 178333 Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTT 7847 |||||||| || ||||| || | || | | ||| || | ||||| || | || || Sbjct 178332 CACCATCGACGATATCTCCTCTGGCG-AGAATGTCTTGATCTCACCTTTGTACTCCACAC 178274 Query 7848 CAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT-----TCAT 7902 | | | || || || | | ||| || | | | ||||| | || ||| Sbjct 178273 GGACCTTTGGCTT---GCCACCTTCTTGGACTACTTCAAAAGACCAGTGTTTACGGTCAG 178217 Query 7903 ATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAAC 7962 | |||| ||| | || || | ||||| | | ||| |||| || || Sbjct 178216 A-CGTC----ACCGACGGATCATCGAATCGCCGACCGATCAATCTCTTGACATCGAACAC 178162 Query 7963 TGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATT 8022 ||||| || || ||||| || ||| || || || || || || || || ||||| | Sbjct 178161 GGTGTTGTTCGGATTCATTGCGACTTGATTTTTAGCGGCATCACCAATCAGTCGTTCGGT 178102 Query 8023 ATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGCAATAA 8081 | || ||||| || || || | |||| || || ||||| ||||| ||||| ||||| | Sbjct 178101 A---TCTGTAAATGCAACATA-GCTGGGTGTTGTGCGATTTCCTTGATCGTTGGCAATGA 178046 Query 8082 TTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATAC 8141 |||| || | | ||| | || || ||||| ||||| || || || | ||| || | Sbjct 178045 TTTCCACTTTTCCATGTTGGAACACTCCAACGCATGAATATGTCGTACCCAGATCGATTC 177986 Query 8142 C 8142 | Sbjct 177985 C 177985 >seq1355 Length=477810 Score = 149 bits (164), Expect = 8e-31 Identities = 421/639 (66%), Gaps = 12/639 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || || ||||| ||||| || || || || ||| || || || || | || Sbjct 108892 ATCAAAGTCCTCACCTCCCAAATGCGTGTCACCACTGGTTGCCACTACCTCGAACACGCC 108833 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||||| | ||||| ||||||||||| ||||| ||||||| || | | || | Sbjct 108832 GTTCTCAATGGTCAACAAGGAAACATCAAAAGTACCTCCACCCAAATCGTACACCAGAAT 108773 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | || | || || || ||| | |||||| ||||| || || ||||| ||||| Sbjct 108772 GTTCTTCTCACCCTCCTTTTT---ATCCAAACCGTATGCGATGGCAGCAGCCGTAGGTTC 108716 Query 7636 ATTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||| || || || | ||| || || ||||| || | ||||| || || ||||| | Sbjct 108715 ATTGATTATTCGCA-ACACTTTTAGACCAGCGATGACACCAGCATCCTTTGTGGCTTGAC 108657 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || | ||||||||||||||| || || || | ||| |||| ||||||| || || | Sbjct 108656 GCTGTGCATCGTTAAAGTAGGCGGGAACAGTAATGACGGCGTGCGTGACTGGTTTGCCCA 108597 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 ||| | ||| || | || ||||| || || ||||| | || || ||||| | | Sbjct 108596 AATAAGCTTCAGCACTTTCCTTCATCTTACCGAGGACCATTGCCGATATTTCTTCCGGAG 108537 Query 7815 CAAAC-TGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC-C 7872 ||||| || | ||||| | || | || | ||| ||||| || | | Sbjct 108536 CAAACGTGCGT-GTTTCCGAGCCAACCTTCACCTGAATGTATGGTTTGTC----GTTCTT 108482 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 | ||||| || ||| ||| || ||||| | ||| || | || ||| | Sbjct 108481 GTTAATAACTGTAAACGGGAAATGCTTGATATCCTTTTGAACGGACTCCTCATTGAACGT 108422 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 || || || || ||||| | || |||| || |||| ||||| | | || || Sbjct 108421 TCGGCCAATGAGTCGCTTCACGTCGAAAATGGTATTTTCCGGGTTTGTCGTCAGCTGATT 108362 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||||| || || |||| ||| |||||| | | || || ||||| ||||| || || Sbjct 108361 TTTCGCAGCATCTCCGACAAGCCGTTCACCCTCGGCTGTGAATGCGACATACGACGGTGT 108302 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCG 8091 | ||||| ||||| || || ||||| ||||| || || Sbjct 108301 AATCCGATTTCCTTGATCATTTGCAATTATTTCCACCCG 108263 >seq2115 Length=135315 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 105868 GCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGG 105927 ||||||||||| | ||| || |||||||| || ||||| || || || | | |||||| Sbjct 41848 GCACACTCTTTGAGTGTGTCATAAATACCTTCAATACTGTCGTCTTTCATTGTGATCAGG 41907 Query 105928 AAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGA 105987 ||||| |||||||| ||||||| |||||| || ||||| || |||| ||||| Sbjct 41908 AAACAGCTGGACATTTGCGGTCTGGTAGTACCACTGTTAAACAGGGTCGGTGAAGCATGG 41967 Query 105988 ATGAAC 105993 ||||| Sbjct 41968 GTGAAC 41973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635098280532320