Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value seq1110 111 4e-20 >seq1110 Length=2318 Score = 111 bits (122), Expect = 4e-20 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 15599 AAAGCGGAGAATGATCAGCTGCGTGCTGATGTCGCTAACGGCACTCACCGGTTGCAGCTC 15658 ||||| || |||||| ||||||| |||||| || || || |||||||| || Sbjct 1834 AAAGCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATC 1893 Query 15659 AACGCCACCTGTGAGCGAGTGCGTAACGCCACCGGCGCCACCGGCGGCGCTAATGCAACC 15718 || || |||| || ||||||| | |||||| |||| |||||| | ||||||| || Sbjct 1894 AAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCC 1953 Query 15719 GCCCCCCGACTTGATGACGCCGCTCAACGGGATTATTTTTCCCTTAGAAACAGG 15772 |||||||||| | ||| ||||| ||||||||||||| |||| ||| | ||| Sbjct 1954 TCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGG 2007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127788601614336