Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_019416.1 Length=38513 Score E Sequences producing significant alignments: (Bits) Value seq1067 125 2e-24 >seq1067 Length=4963 Score = 125 bits (138), Expect = 2e-24 Identities = 91/110 (83%), Gaps = 6/110 (5%) Strand=Plus/Minus Query 22544 GCTGCTAACAAAGCACGAAAGGAAGCTGAGTTGGCTNNNNNNNNNNNNNNNNNNGAGCAA 22603 |||||||||||||| ||||||||||||||||||||| |||||| Sbjct 4927 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCT------GAGCAA 4874 Query 22604 TAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGtttttt 22653 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4873 TAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT 4824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123113643006600