Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_019934.1 Length=39012 Score E Sequences producing significant alignments: (Bits) Value seq1110 111 4e-20 >seq1110 Length=2318 Score = 111 bits (122), Expect = 4e-20 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 21934 GCAGAGCAGCATTTTCAGCATTCGCATCAGCGAGTTCCTTCGTGTATTTGGCGTCGAGCG 21993 |||||||| |||||||||| ||||||||||| | |||||||||||||| || ||||||| Sbjct 1855 GCAGAGCATCATTTTCAGCTTTCGCATCAGCTAACTCCTTCGTGTATTTTGCATCGAGCG 1796 Query 21994 CTGCGACATCGCGCTGGCGAGTCTGCATGTCAGTGATGGTGTCTTTAGCCAGATTTAATT 22053 | || ||||| ||||| || ||||||| ||||| || | | || ||||| || | || Sbjct 1795 CAGCAACATCACGCTGACGCATCTGCATCTCAGTAATTGCCGCGTTCGCCAGCTTCAGTT 1736 Query 22054 C 22054 | Sbjct 1735 C 1735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124710360559824