Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1550 205 6e-47 seq1546 197 9e-45 seq1873 131 1e-24 seq1867 116 2e-20 seq1355 105 4e-17 seq1332 96.9 2e-14 >seq1550 Length=270027 Score = 205 bits (226), Expect = 6e-47 Identities = 404/589 (69%), Gaps = 14/589 (2%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| || ||| | |||||||| | | ||||||| ||| | ||||| || Sbjct 31117 GCGATTGGAATCGATCTGGGAACTACGTTCTCATGTGTAGGTGTGTTCCAAAACAACAAG 31176 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| ||||| ||||||||||| || | ||||| || ||||| | |||||| Sbjct 31177 GTGGAAATTATTGCAAATGACCAAGGAAACCGCACAACTCCTAGTTATGTGGCCTTTACT 31236 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| | | ||||| ||||| ||||| | || | ||| ||||| ||| Sbjct 31237 GAGACGGAACGTTTGATTGGTGATGCGGCTAAGAACCAGGTTGCTATGAATCCATCTAAC 31296 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || | || ||||| || | | || ||||||| | |||||| ||||||||||| Sbjct 31297 ACGGTCTTCGATGCCAAGCGCCTAATCGGTCGTAGGTATGATGACCCCACTGTCCAAGAG 31356 Query 474569 GATATGCGTCAT---TGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA 474625 ||| ||| | ||||| || | |||| | | ||| || ||| | || | Sbjct 31357 GAT---CGTAAAATGTGGCCATTCACACTGATTGAAGAAAATGGCAAGCCAAAAATTCAG 31413 Query 474626 GC--AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTT 474683 | |||||| |||| ||| ||| || | | || | || || || ||||| | Sbjct 31414 GTCGAATACAA--AGGTCAAAGGAAAACGTTCTTTGCTGAGGAGATATCCTCGATGGTGT 31471 Query 474684 TAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGT 474741 | | || ||||| ||| || ||| | ||| | ||| |||| || | ||| ||||| Sbjct 31472 TGACAAAGATGAAGGAAATTGCAGAGGCC-TATTTGGGA-AAGACCGTCAGTGAGGCAGT 31529 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 || ||||| || || || || |||||| |||| | ||||| || || ||||| || | Sbjct 31530 TATCACTGTGCCGGCTTACTTCAATGATAGTCAAAGGCAAGCCACGAAGGATGCAGGGAC 31589 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| ||||| || ||| |||| ||||| ||||||||||||||||| || |||| || Sbjct 31590 GATTGCCGGTCTAAACGTTCTACGGATTATCAATGAACCAACAGCAGCAGCCATTGCGTA 31649 Query 474862 TGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGAT 474910 || || |||||||| | || || ||| ||| ||| | ||||||||| Sbjct 31650 CGGCCTGGATAAGAAGGCCGATAACGAAAGAAACGTTCTCATCTTTGAT 31698 Score = 199 bits (220), Expect = 3e-45 Identities = 381/552 (69%), Gaps = 16/552 (3%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| || ||||| || || || || || || | || | ||| |||| ||||||| Sbjct 92274 TTGGAATCGATTTGGGTACGACATATTCGTGCGTTGGAGTGTTCCAACATGGAAAAGTAG 92333 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||| |||||||| || ||||| ||| | |||||||| |||||| | || || || | Sbjct 92334 AAATCATTGCCAACGATCAAGGAAATCGCACAACACCTAGCTATGTTGCGTTCACGGATA 92393 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | |||| || ||||| ||||| || ||| |||||| ||| ||||| || ||| Sbjct 92394 CCGAACGACTGATTGGCGATGCCGCGAAAAATCAAGTCGCAATCAATCCAAGCAACACTG 92453 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | || ||||| ||||| |||| ||||| || ||||| | | || |||||| Sbjct 92454 TGTTCGATGCGAAAAGGCTGATAGGTCGGCGATTCGATGACCCATCGGTGACGTCTGAT- 92512 Query 474573 TGCGT---CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATA---TATAGAAG 474626 ||| |||||| |||| | ||||| | | |||||||| ||| | | | || Sbjct 92513 --CGTAAACATTGGTCTTTCGAAGTGATCCAAGAAGGTGGTAAGCCAAAGGTTCGTGTAG 92570 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 |||||| | || || || ||| ||| || | || | || ||||||||||| || Sbjct 92571 -AATACAAG--GGGGAGACCAAAACATTCTCGGCAGAGGAGATATCTTCAATGGTGTTGA 92627 Query 474687 CCAAAATGAAACAAACCG-CGAGCTCATATCTTGG-ACAAGAAGTAACTGATGCAGTAAT 474744 | |||||||| | || | |||| | || || || || | | || | ||||| || || Sbjct 92628 CGAAAATGAAGGAGACAGCCGAG-GCGTACCTGGGTACGA-AGGTGAAGGATGCTGTGAT 92685 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 |||||||| || || || || || || |||||||| || || |||||||| | || Sbjct 92686 CACTGTTCCGGCTTACTTCAACGACAGCCAGCGTCAAGCGACAAAGGATGCGGGTACCAT 92745 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| || || || ||||| || || || || ||||| ||||| || || |||||||||| Sbjct 92746 TGCTGGCCTGAACGTTTTGCGAATCATCAACGAACCGACAGCTGCTGCGATTGCTTATGG 92805 Query 474865 TCTTGATAAGAA 474876 | | || ||||| Sbjct 92806 TTTGGACAAGAA 92817 Score = 183 bits (202), Expect = 2e-40 Identities = 382/557 (69%), Gaps = 18/557 (3%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| |||| || ||| | || ||||| ||| ||||| | || | ||| |||| ||| Sbjct 131528 GCAGTTGGGATCGATCTGGGTACTACATACTCGTGTGTTGGAGTGTTCCAACATGGAAAA 131587 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| |||||||| || ||||| ||| | || ||||| |||||| | || || Sbjct 131588 GTGGAAATCATTGCCAACGATCAAGGAAATCGCACGACACCTAGCTATGTTGCGTTCACG 131647 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAA 474507 || || |||| || ||||| ||||| || ||| |||||| || ||| ||||| || Sbjct 131648 GATACCGAACGACTGATTGGCGATGCCGCGAAAAATCAAGTCGCGATC-AATCCAAGCAA 131706 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 ||| | || |||| ||||| | || || || || |||||| | | || || Sbjct 131707 CACTGTGTTCGATGTGAAAAGGCTAATCGGCCGGCGATTCGATGATCCATCGGTGACGTC 131766 Query 474568 TGATATGCGT---CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATA-- 474622 ||| ||| |||||| |||| | || || | | |||||||| ||| | | Sbjct 131767 TGAC---CGTAAACATTGGTCTTTCGATGTTATCCAAGAAGGTGGTAAGCCAAAGGTTCG 131823 Query 474623 -GAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGT 474681 | || |||||| | || || || ||| ||| || | || | || ||||||||||| Sbjct 131824 TGTAG-AATACAAG--GGGGAGACCAAAACATTCTCGGCAGAGGAGATATCTTCAATGGT 131880 Query 474682 TTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAG-TAACTGATGCA 474739 || | |||||||| | || || ||| |||| || || | |||| | | ||||| Sbjct 131881 GTTGACGAAAATGAAGGAGACAGCCGAGG-CATACCTGGGT-ACGAAGGTGAAGGATGCT 131938 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || || |||||||| || || || || || || |||||||| || || |||||||| Sbjct 131939 GTGATCACTGTTCCGGCTTACTTCAACGACAGCCAGCGTCAAGCGACAAAGGATGCGGGT 131998 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 ||||| || || || ||||| || || || || ||||| ||||| || || ||||| Sbjct 131999 GCCATTGCTGGCCTGAACGTTTTGCGAATCATCAACGAACCGACAGCTGCTGCGATTGCT 132058 Query 474860 TATGGTCTTGATAAGAA 474876 |||||| | || ||||| Sbjct 132059 TATGGTTTGGACAAGAA 132075 Score = 138 bits (152), Expect = 7e-27 Identities = 440/676 (65%), Gaps = 6/676 (1%) Strand=Plus/Plus Query 475494 GAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAG 475553 |||| || | ||||||||| || ||| || | ||| | | || | | ||| || Sbjct 31892 GAACAGCCTCTGAACGTGCCAAACGAACTTTGAGTTCAAGTGCCCAGGCCAATGTCGAGA 31951 Query 475554 TTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAG 475613 ||||||| |||||||||||| | || | | | || ||||| | || ||| || | Sbjct 31952 TTGATTCACTTTTTGAAGGACTGGACTTTTACACCACCATTACTCGCGCCCGATTCGAGG 32011 Query 475614 ATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATT 475673 | | | ||||| | || ||| || | || || || ||| ||| || |||||| Sbjct 32012 AACTCAATGCTGATTTGTTCCGAAGTACTTTGGACCCAGTGGAAAAAGCGCTAAGAGATG 32071 Query 475674 CTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTC 475733 | ||| | |||| | ||| | ||||| |||||||| || || |||||||| |||| | Sbjct 32072 CCAAAATGAACAAGACGCAAATTCATGAGATTGTTCTCGTGGGTGGTTCAACCCGAATCC 32131 Query 475734 C-AAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTA 475792 | |||| | ||| || ||||| | | ||| || || ||| |||| || || | | Sbjct 32132 CGAAAATTCAGA-AATTGCTTCAAGAGTTTTTCAACGGAAAAGAGTTGAACAAATCTATC 32190 Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 |||||||||||||| || || ||||||||||| || || || || ||| | | || | Sbjct 32191 AATCCTGATGAAGCAGTAGCCTATGGAGCTGCCGTTCAGGCCGCAATTCTTACTGG--AG 32248 Query 475853 TCAGACGAGAAACTAAATAATA-TTG-TACTTGTTGACGTAACTCCACTTTCATTAGGTC 475910 || | || || | || | ||| | | |||| || || || | || ||||| Sbjct 32249 TCCAATCGGATACCGTACAAGACTTGCTGTTACTTGATGTGACACCTTTGTCCCTAGGTT 32308 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 | ||||| | ||||| | ||||| | || | |||| || |||||||| | Sbjct 32309 TGGAAACTGCGGGAGGTGTGATGACGTCGTTGATCAAACGAAACACGACTATCCCAACAA 32368 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 || || | || ||| |||| || | || ||||| | ||| || || | | Sbjct 32369 AACAAACGCAAACGTTTACCACCTACGCAGACAATCAGCCCGGTGTTTTGATACAGGTTT 32428 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAG 476090 ||||| ||| | | || | ||||| ||| | |||| ||| || | | Sbjct 32429 ACGAAGGCGAACGTGCCATGACCAGGGATAACAACCTCTTGGGAAAATTTGATTTGTCTG 32488 Query 476091 GTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAA 476150 | ||||| || ||||| |||| | || ||||||||||| || ||||| ||||| || | Sbjct 32489 GGATTCCACCCGCTCCTCGAGGTATACCGCAAATTGAAGTCACGTTTGACATTGACGCGA 32548 Query 476151 ATGGTATTCTTAATGT 476166 |||| || || ||||| Sbjct 32549 ATGGAATCCTGAATGT 32564 >seq1546 Length=268189 Score = 197 bits (218), Expect = 9e-45 Identities = 353/507 (70%), Gaps = 14/507 (3%) Strand=Plus/Plus Query 474377 CAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATAT 474436 ||| |||| ||||| ||||| |||||||| || ||||| ||| | |||||||| ||| Sbjct 178027 CAACATGGAAAAGTGGAAATCATTGCCAACGATCAAGGAAATCGCACAACACCCAGCTAT 178086 Query 474437 GTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCT 474496 ||| | ||||| || || |||| || ||||| ||||| |||||| |||||| ||| Sbjct 178087 GTTGCATTTACAGATACCGAACGACTGATTGGTGATGCCGCTAAAAATCAAGTCGCAATG 178146 Query 474497 AATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACC 474556 ||||| || || | || |||| || |||||||| ||||| || |||||| | Sbjct 178147 AATCCGAACAACACCGTGTTCGATGTCAAGAGATTGATCGGTCGGCGATTCGATGATCCG 178206 Query 474557 ACTGTCCAATCTGATATGCGT---CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAA 474613 | || ||||| ||| || ||| ||||| | || | | | ||||| || Sbjct 178207 TCGGTGACGTCTGAC---CGTAAACACTGGTCTTTTGAAGTAGTCCAAGAAGGTGGCAAG 178263 Query 474614 CCATATATAGAAGC--AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTT 474671 ||| | | | | |||| |||||| | || ||| || || || | || | Sbjct 178264 CCAAAGGTCCGTGTGGAGTACAA--AGGTGAGATCAAGACATTCTCGCCAGAGGAGATAT 178321 Query 474672 CTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAA-GT 474729 | || ||||| || | || ||||| | || || ||| |||||||||| || ||| || Sbjct 178322 CGTCGATGGTGTTGACTAAGATGAAGGAGACAGCCGAGG-CATATCTTGG-CACGAAAGT 178379 Query 474730 AACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAA 474789 | ||||| || ||||||||||| || |||||||| || |||||||||||| || || Sbjct 178380 GAAGGATGCTGTGATTACTGTTCCGGCTTATTTTAACGACAGTCAACGTCAAGCGACGAA 178439 Query 474790 AGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGC 474849 |||||||| ||||| | ||| |||||||| ||||| || || ||||| ||||| || Sbjct 178440 GGATGCGGGTGCCATTGCTGCTCTGAATGTTTTGCGTATCATCAACGAACCGACAGCTGC 178499 Query 474850 CGCACTTGCTTATGGTCTTGATAAGAA 474876 || |||| || || || || ||||| Sbjct 178500 TGCGATTGCATACGGGCTAGACAAGAA 178526 >seq1873 Length=396352 Score = 131 bits (144), Expect = 1e-24 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 || || || || ||||| | || |||||| || || ||||||| ||||| | | Sbjct 292706 AGTCGCAGAACCAGATGCAAGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGG 292647 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 || || ||||||||||| || ||||| | ||||||||||| ||||| || |||||| Sbjct 292646 CCGTCCTCCAGTTGCTTTCCCGCGAAAATCAATCGTTGTTGATCTGGAGGGATCCCTTCC 292587 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGT 480733 |||||||||||||| ||||||| ||| || ||||| | || | || ||||| || Sbjct 292586 TTGTCTTGAATCTTGGCTTTGACATTTTCGATGGTATCCGATGCTTCAA-CCTCAAGCGT 292528 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || || ||||| ||||| ||||| || || Sbjct 292527 AATAGTCTTTCCCGTGAGTGTCTTGACGAAGATCTG 292492 >seq1867 Length=410790 Score = 116 bits (128), Expect = 2e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || ||||| || || |||||| | || ||||| | ||||| Sbjct 315242 ACGCAGACGAAGCACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCGGACAGAGT 315301 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || ||||||||||| || || |||||||| | ||| || || ||||| || || || Sbjct 315302 TCGACCGTCTTCAAGTTGTTTGCCGGCAAAAATCAAACGCTGCTGGTCAGGTGGGATGCC 315361 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||||||||| || ||| ||||| ||||| | | | |||||| Sbjct 315362 TTCCTTGTCTTGAATCTTCGCCTTTACATTCTCAATGGTATCGCTTGCTTCAACTTCAAG 315421 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || || || ||||| ||||| ||||| Sbjct 315422 GGTGATGGTCTTCCCAGTAAGTGTCTTCACGAATATTTG 315460 Score = 109 bits (120), Expect = 4e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || ||||| || || |||||| | || ||||| | |||||| Sbjct 315015 CGTAGACGAAGCACCAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCGGACAGAGTT 315074 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | ||||||||||| || || |||||||| | ||| || || ||||| || || ||| Sbjct 315075 CGACCGTCTTCAAGTTGTTTGCCGGCAAAAATCAAACGCTGCTGGTCAGGTGGGATGCCT 315134 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || |||||||||||||| || ||| ||||| ||||| | | | ||||||| Sbjct 315135 TCTTTGTCTTGAATCTTCGCCTTCACATTCTCAATGGTATCGCTTGCTTCAACTTCAAGG 315194 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || |||||||| || ||||| || || || || Sbjct 315195 GTGATCGTCTTACCGGTCAGGGTCTTCACAAATATCTG 315232 Score = 87.8 bits (96), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| || || || || ||||| ||| |||||| | || || |||| | || Sbjct 291436 CGAAGGCGAAGCACTAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCAGACAATGTA 291495 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | ||||| | ||| || ||||| |||||||| ||||| || ||||| || || ||| Sbjct 291496 CGACCGTCTTCCAATTGTTTGCCAGCGAAAATAAGGCGTTGCTGGTCAGGTGGGATGCCT 291555 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||| ||||||||||| ||| || ||||| || ||| || || ||| Sbjct 291556 TCCTTATCTTGAATCTTCGCTTTCACGTTCTCAATTGTGTCACTGGCCTCGACCTCGAGG 291615 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || || || ||||| || ||||| || Sbjct 291616 GTGATAGTCTTGCCAGTCAGCGTCTTCACAAAAATCTG 291653 Score = 87.8 bits (96), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| || || || || ||||| ||| |||||| | || || |||| | || Sbjct 291664 CGAAGGCGAAGCACTAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCAGACAATGTA 291723 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | ||||| | ||| || ||||| |||||||| ||||| || ||||| || || ||| Sbjct 291724 CGACCGTCTTCCAATTGTTTGCCAGCGAAAATAAGGCGTTGCTGGTCAGGTGGGATGCCT 291783 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||| ||||||||||| ||| || ||||| || ||| || || ||| Sbjct 291784 TCCTTATCTTGAATCTTCGCTTTCACGTTCTCAATTGTGTCACTGGCCTCGACCTCGAGG 291843 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || || || ||||| || ||||| || Sbjct 291844 GTGATAGTCTTGCCAGTCAGCGTCTTCACAAAAATCTG 291881 Score = 87.8 bits (96), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| || || || || ||||| ||| |||||| | || || |||| | || Sbjct 291892 CGAAGGCGAAGCACTAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCAGACAATGTA 291951 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | || || ||||| || ||||| |||||||| ||||| || ||||| || || ||| Sbjct 291952 CGACCGTCCTCTAGTTGTTTGCCAGCGAAAATAAGGCGTTGCTGGTCAGGTGGGATGCCT 292011 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||| ||||||||||| ||| || ||||| || ||| || || ||| Sbjct 292012 TCCTTATCTTGAATCTTCGCTTTCACGTTCTCAATTGTGTCACTGGCCTCGACCTCGAGG 292071 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || || || ||||| || ||||| || Sbjct 292072 GTGATAGTCTTGCCAGTCAGCGTCTTCACAAAAATCTG 292109 Score = 86.0 bits (94), Expect = 4e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || ||||| || ||||| |||||||| ||||| || ||||| || || |||||||| Sbjct 291274 TCCTCTAGTTGTTTGCCAGCGAAAATAAGGCGTTGCTGGTCAGGTGGGATGCCTTCCTTA 291333 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 ||||||||||| ||| || ||||| || ||| || || ||||| ||| Sbjct 291334 TCTTGAATCTTCGCTTTCACGTTCTCAATTGTGTCACTGGCCTCGACCTCGAGGGTGATA 291393 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || ||||| || Sbjct 291394 GTCTTGCCAGTCAGCGTCTTCACAAAAATCTG 291425 >seq1355 Length=477810 Score = 105 bits (116), Expect = 4e-17 Identities = 343/522 (66%), Gaps = 13/522 (2%) Strand=Plus/Plus Query 474363 GTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAA 474422 |||| | ||| | || ||||| || ||||||||||| ||||| ||||| ||| | | Sbjct 108240 GTGTTGGTGTGTTTCAGAATGGACGGGTGGAAATAATTGCAAATGATCAAGGAAATCGGA 108299 Query 474423 CAACACCATCATATGTTTCTTTTACTG---AAACTGAACATCTTATTGGAGATGCTGCTA 474479 ||||| || ||||| | || || | | ||||| ||| | ||||||||||| | Sbjct 108300 TTACACCGTCGTATGTCGCATTCACAGCCGAGGGTGAACGGCTTGTCGGAGATGCTGCGA 108359 Query 474480 AATATCAAGCTG-CATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGT 474538 || |||| |||| | | || || | ||||| ||||| || | || || | ||||| Sbjct 108360 AAAATCA-GCTGACGACAAACCCGGAAAATACCATTTTCGACGTGAAGCGACTCATTGGC 108418 Query 474539 CGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATA 474598 || | || |||| | || ||| ||||| |||| || |||| || || Sbjct 108419 CGAACGTTCAATGAGGAGTCCGTTCAAAAGGATATCAAGCATTTCCCGTTTACAGTTATT 108478 Query 474599 AATGTTGGTGGTAAACCATATATAGAAGC-AATACACGCAGGTGAAACTAAACAATTTT- 474656 || | |||||||| || | | || || | ||||| | || ||| Sbjct 108479 AACAAGAACGACAAACCATACATTCAGGTGAAGGTTGGCTCG-GAAAC-ACGCACGTTTG 108536 Query 474657 CACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCG--AGCTCATA 474714 | |||||| |||| || ||||||| | | || ||||| ||| || |||| || Sbjct 108537 CTCCGGAAGAAATATCGGCAATGGTCCTCGGTAAGATGAAGGAAAGTGCTGAAGCT--TA 108594 Query 474715 TCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCA 474774 | | || || ||| || | || || ||||||||||| || || ||||| ||| | || Sbjct 108595 TTTGGGCAAACCAGTCACGCACGCCGTCATTACTGTTCCCGCCTACTTTAACGATGCACA 108654 Query 474775 ACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAA 474834 |||||||| || || ||||| || || || ||||| || || || || || || || Sbjct 108655 GCGTCAAGCCACAAAGGATGCTGGTGTCATCGCTGGTCTAAAAGTGTTGCGAATAATCAA 108714 Query 474835 TGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 |||||| || || || || | || || ||| | ||||| || Sbjct 108715 TGAACCTACGGCTGCTGCCATCGCATACGGTTTGGATAAAAA 108756 Score = 91.5 bits (100), Expect = 1e-12 Identities = 199/298 (67%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 475875 TTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGA 475934 |||||||| |||| || ||| | | | || ||||||| || || || |||||| Sbjct 109356 TTGTACTTCTTGATGTTTGTCCGTTGACCCTTGGAATTGAAACCGTCGGTGGTGTTATGA 109415 Query 475935 CTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTT 475994 |||| || || | || || || ||| ||||| || | ||||||||||| Sbjct 109416 CTAAGCTGATCTCGCGGAACACAGTAATTCCAACGAAAAAGTCGCAGATATTTTCCACTG 109475 Query 475995 ATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTA 476054 | |||| |||||| | || || ||||| || | | |||||| ||| | | || | Sbjct 109476 CTGCTGACAATCAACCCACGGTTACCATTCAGGTGTATGAAGGAGAACGGCCGATGACAA 109535 Query 476055 AAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAG 476114 |||| ||| | | || | || || | ||| ||| || ||||| ||||| | || | Sbjct 109536 AAGACAATCATTACCTCGCAAAGTTCGACCTTACAGGAATCCCTCCAGCTCCTCGCGGTG 109595 Query 476115 TTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 | || || || ||||| || || || || |||| |||||||| || | |||||||| Sbjct 109596 TACCCCAGATAGAAGTCACCTTCGAAATCGATGTGAATGGTATCCTGCAGGTTACTGC 109653 >seq1332 Length=523337 Score = 96.9 bits (106), Expect = 2e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| | |||||| || | |||||| || ||| || || || ||||||| ||||| Sbjct 493994 ACGCAAACGGAGCACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGAGT 494053 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||| | ||||| || |||||||| | ||| || ||||| |||||||| || Sbjct 494054 GCGACCGTCTTCCAACTGCTTGCCTGCAAAAATCAAACGCTGCTGATCTGGAGGAATGCC 494113 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAA 480729 ||||| ||||||||||| ||| || || || |||||| | | | | || | Sbjct 494114 CTCCTTATCTTGAATCTTAGCTTTAACGTTCTCGATCGTATCACTAGCCTCGA-CCTCCA 494172 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| || ||||| || || ||||| |||||||| Sbjct 494173 GAGTGATAGTCTTTCCGGTTAGCGTTTTAACAAAAATTTG 494212 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| ||||| ||||| || || ||| ||||| | || || || | ||||| Sbjct 494223 CGAAGTCGGAGAACAAGGTGGAGCGTAGACTCTTTTTGGATGTTGTAGTCTGAGAGAGTG 494282 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | ||||| | |||||| || |||||||| ||||||||||| || || ||||| ||| Sbjct 494283 CGTCCGTCTTCCAATTGCTTCCCTGCAAAAATCAGACGTTGTTGGTCGGGTGGAATCCCT 494342 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA-GTGTGTGAAGTTTCAAG 480730 ||||| || ||||| || |||||| ||| || |||||| || | | || ||| Sbjct 494343 TCCTTATCCTGAATTTTCGCCTTGACATTTTCGATGGTATCACTTGATTCGACTTCCAA- 494401 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| || || | || || ||||| || || Sbjct 494402 AGTTATGGTTTTCCCTGTCAATGTTTTGACGAATATCTG 494440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267992693183504