Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq61 86.0 8e-12 >seq61 Length=247376 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 47938 GCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAA 47997 ||||| || ||||| || ||||| ||||||||||| |||| || ||||||||| || Sbjct 21908 GCTCTCGTGATCTTGCGTGTTACGAAAGTTTCACCCCGTCGAGGGCTTTCATGATTGAAT 21967 Query 47998 AGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTAC 48057 || || || ||||||| ||| ||| ||||| || ||||| || |||||||| Sbjct 21968 AGGATGCCGTTACAGGCGAACAGATTGTAGGATTCGCGGTAGTTGACAACGATCCAGTAG 22027 Query 48058 CCATAGAGTTTTGCAACACC 48077 | || || || |||||||| Sbjct 22028 GCGTAAAGCTTCGCAACACC 22047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665458230379360