Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1550 322 4e-82 seq1546 228 6e-54 seq1355 168 5e-36 seq1971 95.1 9e-14 >seq1550 Length=270027 Score = 322 bits (356), Expect = 4e-82 Identities = 958/1461 (66%), Gaps = 24/1461 (2%) Strand=Plus/Minus Query 281431 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 281490 |||||| || || ||||| || || | ||||| |||||||||||||| || | |||| Sbjct 32565 CACATTCAGGATTCCATTCGCGTCAATGTCAAACGTGACTTCAATTTGCGGTATACCTCG 32506 Query 281491 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 281550 |||| ||||| ||||| ||||| |||| |||||| || ||||| | || | Sbjct 32505 AGGAGCGGGTGGAATCCCAGACAAATCAAATTTTCCCAAGAGGTTGTTATCCCTGGTCAT 32446 Query 281551 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 281610 ||||| || ||| ||| || || ||| | | ||||| |||| || || || Sbjct 32445 GGCACGTTCGCCTTCGTAAACCTGTATCAAAACACCGGGCTGATTGTCTGCGTAGGTGGT 32386 Query 281611 AAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 281670 ||| | | || ||| || || || ||||||| | || | ||||| | Sbjct 32385 AAACGTTTGCGTTTGTTTTGTTGGGATAGTCGTGTTTCGTTTGATCAACGACGTCATCAC 32326 Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 ||| || || ||||| ||||| || || | ||| || ||||||| || | | | ||| Sbjct 32325 ACCTCCCGCAGTTTCCAAACCTAGGGACAAAGGTGTCACATCAAGTAACAGCAAGTCTTG 32266 Query 281731 AAGTTTTTCATCAGTTTGAC--CAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 281788 | | || | || ||| || |||||| || || |||| ||||| ||||| || Sbjct 32265 TACGGTATC--CGATTGGACTCCAGTAAGAATTGCGGCCTGAACGGCAGCTCCATAGGCT 32208 Query 281789 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGA 281848 || |||||||||||||| | || || || | | ||| || |||||||| | | ||| Sbjct 32207 ACTGCTTCATCAGGATTGATAGATTTGTTCAACTCTTTTCCGTTGAAAAACTCTTGAAGC 32148 Query 281849 AGTTGTCTTACCTTA-GGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 281907 | || ||| | || || || || | ||| || || || | ||||| ||||| | || Sbjct 32147 AATT-TCTGAATTTTCGGGATTCGGGTTGAACCACCCACGAGAACAATCTCATGAATTTG 32089 Query 281908 TGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAA 281967 | || | || ||| | ||| || ||||||| || || || | | | || || Sbjct 32088 CGTCTTGTTCATTTTGGCATCTCTTAGCGCTTTTTCCACTGGGTCCAAAGTACTTCGGAA 32029 Query 281968 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCC 282027 ||| || | | ||||| |||||| || | ||||| ||| | | | || | ||| Sbjct 32028 CAAATCAGCATTGAGTTCCTCGAATCGGGCGCGAGTAATGGTGGTGTAAAAGTCCAGTCC 31969 Query 282028 TTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGC 282087 ||| || | ||||||| || | | | || | ||| | | ||||| || Sbjct 31968 TTCAAAAAGTGAATCAATCTCGACATTGGCCTGGGCACTTGAACTCAAAGTTCGTTTGGC 31909 Query 282088 ACGTTCACATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAAATCTGTT 282145 ||||||| | ||||| | |||| || | || || ||| | |||| | || | Sbjct 31908 ACGTTCAGAGGCTGTTCGCAGTCGACGCAGAGCGCGTTTATTTTCTGAT--AGGTCCTTC 31851 Query 282146 TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA--AGACGATTATCAAAATCTT 282203 || | ||||||||| || |||| || | ||| | || || || | || || || | Sbjct 31850 TTGTGTTTTCTCTTAAACTCTTGAATGAA--ATGGTTCACCAGTCGGGTGTCGAAGTCCT 31793 Query 282204 CACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAG 282263 | || ||||| | |||| || | || | | | |||| || | || ||||| | | Sbjct 31792 CCCCGCCCAAATGTGTATCACCGGCAGTGGATTTCACTTCAAATATGCCCTCTTCGATGG 31733 Query 282264 ACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT 282323 || | | |||||| |||||||||||| | |||||| || || || || |||| | Sbjct 31732 CCAGCACCGAGACATCAAAGGTTCCACCACCGAGATCAAAGATGAGAACGTTTCTTTCGT 31673 Query 282324 TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 282383 | || || ||||| || || ||||||| || || || ||||||||||| ||||| | Sbjct 31672 TATCGGCCTTCTTATCCAGGCCGTACGCAATGGCTGCTGCTGTTGGTTCATTGATAATCC 31613 Query 282384 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 282443 | ||| || ||||| ||||| | |||||||| || |||||||| ||||| ||| | Sbjct 31612 GTAGAACGTTTAGACCGGCAATCGTCCCTGCATCCTTCGTGGCTTGCCTTTGACTATCAT 31553 Query 282444 TAAAATATGCAGGAACAGTAATAACGGCATCTGTTAC-TTCTTTTCCAATATAAGCGCTT 282502 | || || || || ||||| ||||| || || | || ||||| |||| ||| || | Sbjct 31552 TGAAGTAAGCCGGCACAGTGATAACTGCCTCACTGACGGTCTTTCCCAA-ATAGGCCTCT 31494 Query 282503 GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG--GAGAA--TATTG 282558 || ||| ||||| || | || | ||| || || || | || | |||| | || Sbjct 31493 GCAATTTCCTTCATCTTTGTCAACACCATCGAGGATATCTCCTCAGCAAAGAACGTTTTC 31434 Query 282559 CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTT 282618 ||| || | ||| ||| || | || | ||| || | | | ||| | | | Sbjct 31433 CTTTGA--CCTTT--GTATTCGACCTGAATTTTTGGCTTGCCATTTTCTTCAATCAGTGT 31378 Query 282619 AAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAA 282678 |||||||| ||| ||| ||| ||| | |||||| | | | ||| |||| Sbjct 31377 GAATGGCCACATTTTACGATCCTCTTGGACAGTGGGGTCATCATACCTACGACCGATTAG 31318 Query 282679 TCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATC 282738 || || ||||| || | || || | |||||| | ||| | || | || || ||||| Sbjct 31317 GCGCTTGGCATCGAAGACCGTGTTAGATGGATTCATAGCAACCTGGTTCTTAGCCGCATC 31258 Query 282739 TCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTG 282798 ||||||| | |||| ||||| ||||| | ||||| ||||||||||| || ||||| Sbjct 31257 ACCAATCAAACGTTCCGTCTCAGTAAAGGCCACATAACTAGGAGTTGTGCGGTTTCCTTG 31198 Query 282799 ATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGT 282858 ||||| ||||||||||| || || ||||| | ||||||||||| || || || Sbjct 31197 GTCATTTGCAATAATTTCCACCTTGTTGTTTTGGAACACACCTACACATGAGAACGTAGT 31138 Query 282859 TCCTAAATCAATACCAATAGC 282879 ||| | ||| || ||||| || Sbjct 31137 TCCCAGATCGATTCCAATCGC 31117 Score = 201 bits (222), Expect = 8e-46 Identities = 463/693 (67%), Gaps = 7/693 (1%) Strand=Plus/Minus Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247 |||||||| ||||| ||||| |||| | || | || | ||| | | |||| |||| Sbjct 92964 CGATTATCGAAATCCTCACCACCCAGATGCGTGTCACCGGCCGTCGACTTCACTTCGAAA 92905 Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307 | ||||| || | | | || | |||||| || |||||||| | |||||| || Sbjct 92904 ACACCATCGTCGATCGTAAGAATGGAAACATCGAACGTACCACCACCGAGATCAAAGATC 92845 Query 282308 AGTACAT-TCATTT--CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 | |||| || | || | || || || | |||||| |||| |||||||| Sbjct 92844 AACACATGTCGCTCACCTCCACCCACCTTCTTGTCCAAACCATAAGCAATCGCAGCAGCT 92785 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 || ||||| || || |||| |||||| || || |||||||| | || ||||| || || Sbjct 92784 GTCGGTTCGTTGATGATTCGCAAAACGTTCAGGCCAGCAATGGTACCCGCATCCTTTGTC 92725 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCT 282484 ||||| | || ||||| || || || |||||||| || || ||||| | || | Sbjct 92724 GCTTGACGCTGGCTGTCGTTGAAGTAAGCCGGAACAGTGATCACAGCATCCTTCACCTTC 92665 Query 282485 TTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 282544 | || | || || ||||| | |||||||| | || | |||||| || || | Sbjct 92664 GTACCCAGGTACGCCTCGGCTGTCTCCTTCATTTTCGTCAACACCATTGAAGATATCTCC 92605 Query 282545 TCTG--GAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTAC 282602 |||| |||||| || |||| || | ||| ||| || | ||| ||| || Sbjct 92604 TCTGCCGAGAATGTT--TTGGTCTCCCCCTTGTATTCTACACGAACCTTTGGCTTACCAC 92547 Query 282603 CAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAA 282662 | | | || |||| || | ||||| ||| ||| || || | |||||| | Sbjct 92546 CTTCTTGGATCACTTCGAAAGACCAATGTTTACGATCAGACGTCACCGATGGGTCATCGA 92487 Query 282663 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTT 282722 | | ||| || | | ||| ||||| || | ||| ||| ||||||| | ||| ||| Sbjct 92486 ATCGCCGACCTATCAGCCTTTTCGCATCGAACACAGTGTTGCTTGGATTGATTGCGACTT 92427 Query 282723 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 282782 ||| ||| || ||||| |||||||| |||| || || || || | |||||| || | Sbjct 92426 GATTTTTCGCGGCATCGCCAATCAGTCGTTCGGTATCCGTGAACGCAACATAGCTAGGTG 92367 Query 282783 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 282842 |||||||||| |||||||| || ||||| ||||| ||||| |||| ||| | || || | Sbjct 92366 TTGTGCGATTTCCTTGATCGTTGGCAATGATTTCTACTTTTCCATGTTGGAACACTCCAA 92307 Query 282843 CACAACTAAAAGTTGTTCCTAAATCAATACCAA 282875 | || | | || || || ||||| || |||| Sbjct 92306 CGCACGAATATGTCGTACCCAAATCGATTCCAA 92274 Score = 172 bits (190), Expect = 4e-37 Identities = 927/1461 (63%), Gaps = 24/1461 (2%) Strand=Plus/Plus Query 281431 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 281490 |||||| |||||||| || ||||| | || || || || || || || ||||| || | Sbjct 73085 CACATTCAGAATACCGTTCGCATCTATGTCGAAAGTCACCTCGATCTGTGGGACTCCACG 73144 Query 281491 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 281550 | || || || ||||| || | ||| | |||| ||||| || ||| | Sbjct 73145 TGGGGCCGGAGGAATCCCCGACAGCTCGAATTTGCCCAACAGGTTATTGTCACGAGTCAT 73204 Query 281551 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 281610 || ||||| || | | |||||| || ||| ||||| || ||||| || || Sbjct 73205 CGCACGCTCACCTTCATACACTTGGATCAATACACCAGGCTGATTGTCCGAATAGGTCGT 73264 Query 281611 AAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 281669 ||| |||| | | ||| |||||||| ||||| | | || | | |||||| | Sbjct 73265 AAACG-TCTGCGTCTGTTTGGTTGGAATTGTGGTGTTCCGCTTGATCAAAGCGGTCATCA 73323 Query 281670 TACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTT 281729 ||||||||| ||||| ||||| | || | |||| || || | || | | | | Sbjct 73324 CACCACCAGCGGTTTCCAAACCCAAGGACAACGGAGCTACGTCCAACAGAAGCAGGTCCT 73383 Query 281730 GAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789 | | || || | | ||| |||||||| || || | ||| |||||||| || | Sbjct 73384 GCACTTGCTCGGATTTATCGCCACTTAGAATAGCAGCCTGCACAGCGGCACCATAAGCGA 73443 Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGA 281848 | || ||||| ||||| | | | || | | ||| |||||||| |||| |||| | Sbjct 73444 CGGCCTCATCCGGATTGATCGACTTGTTCAACTCTTTGCCATTGAAGAAATCCTGAAGCA 73503 Query 281849 AGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 281908 | || | | ||||| |||||||||| ||| || || || | ||||| ||||| | ||| Sbjct 73504 ACTTCTGT-ACCTTTGGAATACGAGTTGAACCACCGACAAGGACAATCTCATGGA--TGT 73560 Query 281909 GAT--TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT-CTA 281965 | || |||| |||| ||| ||| | || || || || || | ||| | Sbjct 73561 CCTGCTTGTCCATCTTTGCATCACGCAAAGCCTTCTCCACAGGGTCCATTGT-GCTACGG 73619 Query 281966 AACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAA 282023 |||| ||| | | || || || || || | |||| | || | || || || | Sbjct 73620 AACAGGTCGGCATTCAGCTCCTCAAAACGTGCACGGGTAATGG--ACGTGTAAAAGTCGA 73677 Query 282024 TTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAG---TCGAAGAAGATAGTGCAC 282080 | |||||||||| |||||| | || || | | ||| | ||||| || |||| Sbjct 73678 TACCTTCGAACAGAGAATCGATCTCGATGTTGGCTTGCGCACTCGAACTCAAT-GTGC-- 73734 Query 282081 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAA 282138 |||| || || || || || || | || | || | || || |||| | || | | | Sbjct 73735 GTTTTGCGCGCTCGCAAGCAGTGCGAAGACGACGAACAGCGCGTTTGTT--TTCACTAAT 73792 Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 282198 ||| | || | ||| | |||||| || | || | | || | ||| |||| || Sbjct 73793 GTCTTTCTTGTGTTTCCGCTTGAACTCCTGAATGAAGTGATTCACCATACGGATATCGAA 73852 Query 282199 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 282258 ||| ||||| ||||| | ||| | ||||| |||| | || | ||| | || || || Sbjct 73853 ATCCTCACCGCCCAAGTGAGTGTCACCTGAGGTAGACTTCACCTCGAAGATGCCCTCCTC 73912 Query 282259 AAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 282318 | | | || | ||||| || |||||||| | ||| ||||| || |||| | | Sbjct 73913 GATGGTAAGAATCGACACATCGAAAGTACCACCACCAAGATCGAAAATCAGAACATGCCT 73972 Query 282319 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 282378 || | ||||| || | || || |||| |||||||| || || || || || Sbjct 73973 CTCAGCACCAACCTTTTTGTCCAACCCGTATGCAATCGCAGCAGCCGTCGGCTCGTTGAT 74032 Query 282379 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 282438 ||| | | ||| || | || || | || ||||| || || ||||| | ||| Sbjct 74033 AATCCGCTGAACGTTTAAGTTGGCGATACGACCCGCATCCTTCGTAGCTTGACGTTGACT 74092 Query 282439 ATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGC 282498 || || || || ||||| ||||| | || ||||| | || | || | || || Sbjct 74093 GTCATTGAAGTAGGCAGGCACAGTGACGACTGCATCCTTCACGGTGGTGCCCAAGTAGGC 74152 Query 282499 GCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTG 282558 || | | |||||||| | |||| ||| | || || | ||| || || || Sbjct 74153 TTCGGCGATCTCCTTCATTTTCCCCAAAACCATAGCCGATATCTCTTCGGGGGAGAATGT 74212 Query 282559 CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTT 282618 ||| | || | || |||| || | || || | | || || | Sbjct 74213 CTTTGTCTCGCCTCTGTACTCCACTTGAATCTTCGGCTTGCCTTTGTCGTCAACGACACT 74272 Query 282619 AAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAA 282678 |||||||| | |||||| || ||||| || |||| || | ||| || || Sbjct 74273 GAATGGCCAGTGTTTCATGTCGGATTGCACCGAAGCATCATCGAATCGGCGACCGATCAA 74332 Query 282679 TCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATC 282738 ||| || ||||| |||| || ||||||||||| | ||| | || | || |||||||| Sbjct 74333 TCGCTTGGCATCGAAAACGGTGTTGGTTGGATTCATCGCAACCTGGTTCTTAGCTGCATC 74392 Query 282739 TCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTG 282798 || || || |||| || || ||||| | ||||| ||||||||||| || ||||| Sbjct 74393 ACCGATGAGGCGTTCGGTGTCGGTAAACGCCACATAACTCGGAGTTGTGCGGTTTCCTTG 74452 Query 282799 ATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGT 282858 || || ||||| || || || || |||| || | || || || || | | ||||| Sbjct 74453 GTCGTTGGCAATGATCTCGACCTTCCCATGCTGGAACACTCCGACGCAGGAATAGGTTGT 74512 Query 282859 TCCTAAATCAATACCAATAGC 282879 || ||||| || |||||||| Sbjct 74513 GCCCAAATCGATTCCAATAGC 74533 >seq1546 Length=268189 Score = 228 bits (252), Expect = 6e-54 Identities = 742/1137 (65%), Gaps = 23/1137 (2%) Strand=Plus/Minus Query 281756 AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCA 281815 ||||| || || || | ||||| ||||| ||||| || ||||| ||||| | | | Sbjct 179105 AGAATCGCAGCCTGTACTGCAGCCCCATACGCAACCGCCTCATCCGGATTGATCGACTTG 179046 Query 281816 TTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGA 281874 || | | ||||||||||| |||| ||| || | ||| ||||| || || |||| Sbjct 179045 TTCAACTCCTTACCATTGAAGAAATCCTGAAGCAGCT-TCTGCACCTTCGGGATTCGAGT 178987 Query 281875 TGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAA 281934 || || || || || ||||| ||||| | || || |||| || | ||| || Sbjct 178986 CGAACCACCCACCAACACAATGTCATGAATCTCACTCTTGTCCATCTTCGCATCGCGCAA 178927 Query 281935 AACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTT 281994 | | || || || || ||||| | | | |||| ||||| | || || || || Sbjct 178926 AGCCTTCTCCACCGGGTCAAGCGTACCACGGAACAGGTCTGCATTCAGCTCCTCAAACCG 178867 Query 281995 AGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATC 282052 ||| | ||| || ||| | || || ||||| || ||| |||| || |||| ||||| Sbjct 178866 AGCACGAGT--GATCGACGTGTAGAAATCAATACCCTCGTACAACGAGTCAATCTCAATG 178809 Query 282053 GTAGTTTGAG---TCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGT 282109 | | || | ||||| | ||||| | |||||||||||||| || |||| || Sbjct 178808 TTCGCCTGCGCACTCGAACTCAA-AGTGCGC--TTAGCACGTTCACACGCAGTCCGAAGG 178752 Query 282110 CTTCGTAAGGCT--TTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTT 282167 | || | || |||| || || | || | || | || | || || || | Sbjct 178751 CGACGGACAGCACGTTTGTTGTCCGAA--ATGTCCTTCTTGTGCTTGCGTTTAAACTCCT 178694 Query 282168 CAACACACCATG--TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCC 282225 || | | ||| | || | |||||||| ||||| ||||| ||||| | || | || Sbjct 178693 GAATAAA--ATGACTCACCATCCGATTATCGAAATCCTCACCACCCAAATGCGTGTCACC 178636 Query 282226 TGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGT 282285 | ||| | | |||| ||| | ||||| || | | | | | ||||||| || Sbjct 178635 GGCCGTCGACTTCACTTCGAATACACCATCGTCGATCGTGAGGATGGAAACATCAAATGT 178576 Query 282286 TCCACCACCCATATCAAAAATAAGTACAT-TCATTT--CTTTGTCTTGGTTTTTATCAAG 282342 |||||||| | |||||| || || || | || | |||| | || || || || Sbjct 178575 ACCACCACCAAGATCAAATATCAGCACGTGTCGCTCACCTTTACCCACCTTCTTGTCTAG 178516 Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402 || || |||| |||||||| || ||||| || || || | ||||||||| ||| |||| Sbjct 178515 CCCGTATGCAATCGCAGCAGCTGTCGGTTCGTTGATGATACGCAAAACATTCAGAGCAGC 178456 Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 ||| || ||||| || || ||||| | ||| ||||||||||| || |||||||| Sbjct 178455 AATGGCACCCGCATCCTTCGTCGCTTGACGTTGACTGTCGTTAAAATAAGCCGGAACAGT 178396 Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACT 282522 ||| || ||||| | |||| | |||| ||| || ||||| | ||||| ||| | Sbjct 178395 AATCACAGCATCCTTCACTTTCGTGCCAAGATATGCCTCGGCTGTCTCCTTCATCTTAGT 178336 Query 282523 TAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGATAC 282582 || | ||| || || || | ||||| || || |||| ||| || || || Sbjct 178335 CAACACCATCGACGATATCTCCTCTGGCGAGAATGTCTTGATCTCACCTTTGTACTCCAC 178276 Query 282583 TTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGA 282642 | | ||| || ||| | | | |||| ||| | ||| | ||| || || Sbjct 178275 ACGGACCTTTGGCTTGCCACCTTCTTGGACTACTTCAAAAGACCAGTGTTTACGGTCAGA 178216 Query 282643 TTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATT 282702 || | |||| || | ||| || |||| || |||| || | || || Sbjct 178215 CGTCACCGACGGATCATCGAATCGCCGACCGATCAATCTCTTGACATCGAACACGGTGTT 178156 Query 282703 GGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT 282762 | | ||||| | ||| |||||| ||| || ||||| |||||||| |||| || ||||| Sbjct 178155 GTTCGGATTCATTGCGACTTGATTTTTAGCGGCATCACCAATCAGTCGTTCGGTATCTGT 178096 Query 282763 AAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTT 282822 ||||| |||||| || ||||||||||| |||||||| || ||||| ||||| ||||| Sbjct 178095 AAATGCAACATAGCTGGGTGTTGTGCGATTTCCTTGATCGTTGGCAATGATTTCCACTTT 178036 Query 282823 ACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 |||| ||| | || || || || | | || || || | ||| || |||| ||| Sbjct 178035 TCCATGTTGGAACACTCCAACGCATGAATATGTCGTACCCAGATCGATTCCAACAGC 177979 >seq1355 Length=477810 Score = 168 bits (186), Expect = 5e-36 Identities = 441/666 (66%), Gaps = 14/666 (2%) Strand=Plus/Minus Query 282187 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 282246 ||| | |||||| || ||||||||||| | || | || || || ||| | ||| Sbjct 108898 ACGCTGATCAAAGTCCTCACCTCCCAAATGCGTGTCACCACTGGTTGCCACTACCTCGAA 108839 Query 282247 AAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAAT 282306 | || | |||| | ||| | | ||||||| || || ||||||| ||| | | Sbjct 108838 CACGCCGTTCTCAATGGTCAACAAGGAAACATCAAAAGTACCTCCACCCAAATCGTACAC 108779 Query 282307 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 282366 || | ||| | || || | ||||||| | ||| || || | |||||||| || Sbjct 108778 CAGAATGTTCTTCTCACCCTCCT---TTTTATCCAAACCGTATGCGATGGCAGCAGCCGT 108722 Query 282367 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426 |||||||| || |||| ||| || || |||||||| || || ||||| || ||||| Sbjct 108721 AGGTTCATTGATTATTCGCAACACTTTTAGACCAGCGATGACACCAGCATCCTTTGTGGC 108662 Query 282427 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTT 282486 ||| | |||| ||||||||| || || ||||||||||| ||||| | || ||| ||| Sbjct 108661 TTGACGCTGTGCATCGTTAAAGTAGGCGGGAACAGTAATGACGGCGTGCGTGACTGGTTT 108602 Query 282487 TCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC 282546 || | |||||| || ||| ||||| |||| | | ||||| || |||| ||| Sbjct 108601 GCCCAAATAAGCTTCAGCACTTTCCTTCATCTTACCGAGGACCATTGCCGATATTTCTTC 108542 Query 282547 TGGAG-AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAA 282605 |||| || ||| | | ||| | || | || |||||||| | Sbjct 108541 CGGAGCAAACGTGCGT-GTTTCCGAGCCAACCTTCACCTGAATGTATGGTTTGTCGTTCT 108483 Query 282606 CATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 282665 ||||||||| |||| || ||| || ||||| |||||| | ||||| || Sbjct 108482 TGTTAATAACTGTAAACGGGAAATGCTTGATATCCTTTTGAACGGACTCCTCATTGAACG 108423 Query 282666 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTT---GGATTAACTGCAGCTT 282722 || ||||| | ||| || | || ||||| ||||| || || || | |||| | Sbjct 108422 TTCGGCCAATGAGTCGCTTCACGTCGAAAATGGTATT--TTCCGGGTTTGTCGTCAGC-T 108366 Query 282723 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCT---CTGTAAATGAAACATATGATG 282779 ||| ||| || |||||||| | || |||| || |||| |||| ||||| || | Sbjct 108365 GATTTTTCGCAGCATCTCCGACAAGCCGTTCACCCTCGGCTGTGAATGCGACATACGACG 108306 Query 282780 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACAC 282839 | || | ||||| ||||||||||| ||||| ||||| || ||||| || | |||| Sbjct 108305 GTGTAATCCGATTTCCTTGATCATTTGCAATTATTTCCACCCGTCCATTCTGAAACACAC 108246 Query 282840 CTACAC 282845 | |||| Sbjct 108245 CAACAC 108240 >seq1971 Length=252229 Score = 95.1 bits (104), Expect = 9e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341 |||| ||| |||| || || ||| |||| || ||||||||||||||||| ||| | || Sbjct 43386 TTGAAAGGCAAAGCTGGCCGGATTCGAGGCAACTTGATGGGAAAGCGTGTTGATTTTTCC 43327 Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTC 432401 || |||||||| || || ||||||| ||| | ||| | |||| |||||||| | | Sbjct 43326 GCGCGTACAGTCATCACAGCTGATCCGAATTTGAATCTTGACCAAGTGGGTGTTCCGCGC 43267 Query 432402 ATTATTGCGAAAAATCTTAC 432421 | |||||| |||| || || Sbjct 43266 ACAATTGCGCAAAACCTAAC 43247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740416931574648