Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1346 87.8 2e-12 >seq1346 Length=494612 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 ||||| | |||||||| | || || | |||||| || || || ||||||||||| || Sbjct 248689 TGGTTCAAATAGACGTGAGAATCTCCGATGGTGTGAACGAATTCGCCCGGCTTAAGTCCA 248748 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 || | ||| || | ||||||||| || || ||||| || || |||||||| |||| ||| Sbjct 248749 GTTAGGTGCGCAATCATGTAGGTCAGGAGGGAGTAACTTGCGATGTTGAACGGGATACCC 248808 Query 147052 A 147052 | Sbjct 248809 A 248809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583456287427200