Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09- 24] 478,538 sequences; 547,921,014 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq31829 91.5 2e-13 >seq31829 Length=2224 Score = 91.5 bits (100), Expect = 2e-13 Identities = 203/305 (67%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || |||||||| || ||||||||| ||||| ||||| || ||||| ||||| Sbjct 2108 ATGTAAGTGTCGATGAGAAGAGAGTACATTTCAGAGTGAATGTTTTCGATGGCAATCTGC 2049 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 | ||||||||||| || |||| ||| ||||| ||| ||| ||||| | | Sbjct 2048 ATACCGTAAAAGCAGCGTATCTCCGGTATCTGAACCTCCTGACTGAAACGTTCAAGCAAA 1989 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || || ||||| || ||||| || ||||| || ||||| | | || |||| Sbjct 1988 TTCTCTAGTACGATCCCATCGCTTGCAGCGAAGAATGCCAAGACGTAGGAGATAAAATGA 1929 Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473 ||| || | ||||| || ||||| | || || || || | ||| || ||||| Sbjct 1928 CGCTCGCCCACTTTAAGACTGCTCCAGTGCGACAAGTCCTTTGAAAGATCAACCTCTTCT 1869 Query 17474 GGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATG 17533 ||||| || || || || || || || | | ||| | || | ||||||||| Sbjct 1868 ACTGTCCAGAAGGAGGCAACGGCTTTCTTGTAAAATTGCCATACGTCGTGGTATTGTATT 1809 Query 17534 GGGAA 17538 || || Sbjct 1808 GGAAA 1804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514449784545840